Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 3e-18 seq22 93.3 1e-16 >seq8 Length=1553183 Score = 98.7 bits (108), Expect = 3e-18 Identities = 179/254 (70%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCT--CGCAGACGCTGAAGTCGGCGATC 185 |||||||||| ||||| | || | ||| |||| |||| || ||||| || ||| Sbjct 1187867 GTGAACCTTGCGAATGAAATGCTTGATCAT-TTCTTCCGCA-ACATCAAAGTCAGCAATC 1187924 Query 186 ACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGC 245 |||||||| ||| || || || |||| || ||||| ||||| ||||| | ||| | Sbjct 1187925 ACGCCGTCCCGCATGGGGCGGATAGCAGTGATGTTGCCCGGTGTCCGGCCCACCATCAGT 1187984 Query 246 TTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGG--TCCG-AATGGCC 302 ||||| || || || || | || || || || ||| | || | ||||||| Sbjct 1187985 TTGGCTTCTTCCCCAACAGCCA-GAAGCTG--CTTCTTGCCACGCACTTCGGCAATGGCC 1188041 Query 303 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 362 || || || |||||||| ||||| || ||||| | || |||| |||||||||||| Sbjct 1188042 ACGACTGACGGCTCATTGAGGACAATGCCGCGTCCTTTGACATAAACGAGGGTGTTGGCA 1188101 Query 363 GTGCCCAGGTCAAT 376 || ||||||||||| Sbjct 1188102 GTACCCAGGTCAAT 1188115 >seq22 Length=1073832 Score = 93.3 bits (102), Expect = 1e-16 Identities = 178/254 (70%), Gaps = 10/254 (4%) Strand=Plus/Minus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCT--CGCAGACGCTGAAGTCGGCGATC 185 |||||||||| ||||| | || | ||| |||| |||| || ||||| || ||| Sbjct 788096 GTGAACCTTGCGAATGAAATGCTTGATCAT-TTCTTCCGCA-ACATCAAAGTCTGCAATC 788039 Query 186 ACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGC 245 |||||||| ||| || || || |||| || ||||| ||||| ||||| | ||| | Sbjct 788038 ACGCCGTCCCGCATGGGGCGGATAGCAGTGATGTTGCCCGGTGTCCGGCCCACCATCAGT 787979 Query 246 TTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGG--TCCG-AATGGCC 302 ||||| || || || || | || || || || || | || | ||||||| Sbjct 787978 TTGGCTTCTTCCCCAACAGCCA-GAAGCTG--CTTCTTGCCTCGCACTTCGGCAATGGCC 787922 Query 303 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 362 || || || |||||||| ||||| || ||||| | || |||| |||||||||||| Sbjct 787921 ACGACTGACGGCTCATTGAGGACAATGCCGCGTCCTTTGACATAAACGAGGGTGTTGGCA 787862 Query 363 GTGCCCAGGTCAAT 376 || ||||||||||| Sbjct 787861 GTACCCAGGTCAAT 787848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353573807840