Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq300 147 2e-33 seq73 147 2e-33 seq22 147 2e-33 seq15 147 2e-33 seq8 147 2e-33 >seq300 Length=136790 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 86474 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 86533 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 86534 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 86593 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 86594 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 86629 >seq73 Length=471550 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 243033 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 242974 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 242973 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 242914 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 242913 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 242878 >seq22 Length=1073832 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 472666 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 472725 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 472726 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 472785 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 472786 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 472821 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 1052102 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 1052043 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 1052042 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 1051983 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 1051982 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 1051947 >seq15 Length=1383265 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 153290 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 153349 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 153350 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 153409 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 153410 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 153445 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 329707 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 329766 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 329767 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 329826 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 329827 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 329862 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 1022869 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 1022928 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 1022929 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 1022988 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 1022989 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 1023024 >seq8 Length=1553183 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 328306 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 328365 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 328366 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 328425 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 328426 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 328461 Score = 147 bits (162), Expect = 2e-33 Identities = 126/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 900111 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 900170 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||||| |||||||||||||||| || ||||||||||||||||| | | || | || Sbjct 900171 CTCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTC 900230 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 900231 CGACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTA 900266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473591122220