Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq26 95.1 2e-17 seq22 95.1 2e-17 >seq26 Length=998041 Score = 95.1 bits (104), Expect = 2e-17 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 ||||||||||| ||| | || |||||||| || || | || |||||| || ||||| Sbjct 294564 GCAAGGAAGGCG-CTTTGCGGGATTTCCACCTTACCAAACTGCCGCATGCGCTTCTTACC 294506 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | || ||||| |||||||| |||||||||||| | |||||||| || ||||| || Sbjct 294505 TTCTTTCTGCTTTTCAAGCAGTTTGCGCTTACGGGAAATATCACCGCCATAACATTTTGC 294446 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 | || | ||| || ||| || || |||||||| | || | |||||| || Sbjct 294445 CGTCACATCTTTTGACAGCGCCCCGATGGTTTCACGCGCAATCACCTTGCTGCCAATAGC 294386 Query 276 GGCCTGGATCGC 287 |||||| | ||| Sbjct 294385 GGCCTGAACCGC 294374 >seq22 Length=1073832 Score = 95.1 bits (104), Expect = 2e-17 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 ||||||||||| ||| | || |||||||| || || | || |||||| || ||||| Sbjct 106277 GCAAGGAAGGCG-CTTTGCGGGATTTCCACCTTACCAAACTGCCGCATGCGCTTCTTACC 106335 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | || ||||| |||||||| |||||||||||| | |||||||| || ||||| || Sbjct 106336 TTCTTTCTGCTTTTCAAGCAGTTTGCGCTTACGGGAAATATCACCGCCATAACATTTTGC 106395 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 | || | ||| || ||| || || |||||||| | || | |||||| || Sbjct 106396 CGTCACATCTTTTGACAGCGCCCCGATGGTTTCACGCGCAATCACCTTGCTGCCAATAGC 106455 Query 276 GGCCTGGATCGC 287 |||||| | ||| Sbjct 106456 GGCCTGAACCGC 106467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838383776960