Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1669 304 4e-80 seq543 147 7e-33 seq1207 75.2 4e-11 >seq1669 Length=1433 Score = 304 bits (336), Expect = 4e-80 Identities = 168/168 (100%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 1374 Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 1314 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1266 >seq543 Length=64467 Score = 147 bits (162), Expect = 7e-33 Identities = 83/84 (99%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 18393 AGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 18334 Query 419 GAGGCATTTGGCTACCTTAAGAGA 442 |||||||||||||||||||||||| Sbjct 18333 GAGGCATTTGGCTACCTTAAGAGA 18310 >seq1207 Length=4506 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||| |||||| |||| |||| | ||| |||| ||| |||| ||||||||| || Sbjct 4350 TCGTTACGCCATTCGTGCGGGTCAGAATTTACCTGACAAGGAATTTCGCTACCTTAGGAC 4291 Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-GGTT 478 || |||||||| ||||||||||| | |||| |||| Sbjct 4290 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTT 4253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635168358880