Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq15 86.0 2e-12 >seq15 Length=1383265 Score = 86.0 bits (94), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 29769 CCAGGGCTGGAAACTGGGCGGGGCCATTAAAACCACCGAGCGCAAACTGGCTGAAGGGGT 29828 ||||||||||| || ||| || || || || |||| || ||||| ||||| || Sbjct 840548 CCAGGGCTGGACGCTCTCCGGAGCTATCAAGACAGCCGAACGGAAACTCGCTGACGGCAG 840607 Query 29829 GCTGGTGCATGGTGACCAGCCCCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAGCC 29888 ||| | ||| ||| |||||| | ||||| ||| ||| |||| ||| ||| ||| | Sbjct 840608 CCTGCTCCATTGTGGGCAGCCCATCATGGCGTGGGCCGTCAGCAACGCCAAGGTAGAGGC 840667 Query 29889 TAAAGGTAACGCCATTCTTATCACCAAACAG---GCCAGTGGACGGGGAAAAATTGACCC 29945 || |||||||| | || ||||| ||| ||| || | | ||||||||||| Sbjct 840668 GCGTGGCAACGCCATCATCATTACCAAGCAGGCTGCCGGTTATCTG---AAAATTGACCC 840724 Query 29946 GCTGATGGCGCTGTTCAATGCGGT 29969 ||| ||| | ||| |||| ||||| Sbjct 840725 GCTCATGTCACTGCTCAACGCGGT 840748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175541566291260