Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq15 86.0 2e-12
>seq15
Length=1383265
Score = 86.0 bits (94), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 29769 CCAGGGCTGGAAACTGGGCGGGGCCATTAAAACCACCGAGCGCAAACTGGCTGAAGGGGT 29828
||||||||||| || ||| || || || || |||| || ||||| ||||| ||
Sbjct 840548 CCAGGGCTGGACGCTCTCCGGAGCTATCAAGACAGCCGAACGGAAACTCGCTGACGGCAG 840607
Query 29829 GCTGGTGCATGGTGACCAGCCCCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAGCC 29888
||| | ||| ||| |||||| | ||||| ||| ||| |||| ||| ||| ||| |
Sbjct 840608 CCTGCTCCATTGTGGGCAGCCCATCATGGCGTGGGCCGTCAGCAACGCCAAGGTAGAGGC 840667
Query 29889 TAAAGGTAACGCCATTCTTATCACCAAACAG---GCCAGTGGACGGGGAAAAATTGACCC 29945
|| |||||||| | || ||||| ||| ||| || | | |||||||||||
Sbjct 840668 GCGTGGCAACGCCATCATCATTACCAAGCAGGCTGCCGGTTATCTG---AAAATTGACCC 840724
Query 29946 GCTGATGGCGCTGTTCAATGCGGT 29969
||| ||| | ||| |||| |||||
Sbjct 840725 GCTCATGTCACTGCTCAACGCGGT 840748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175541566291260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |