Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1592 405 4e-108 seq1635 284 1e-71 >seq1592 Length=614636 Score = 405 bits (448), Expect = 4e-108 Identities = 593/838 (71%), Gaps = 3/838 (0%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||| ||||||||||| ||||| ||||| ||| | || || ||| || |||| Sbjct 388212 AGGCGGAAGCCTCCTTCTGGACCGTGGAAGAGGTGGATCTATCGAAGGACGCGACGGACT 388153 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 ||| ||| | | | || | | || || |||||| |||| ||||| || | Sbjct 388152 GGGCCCGTCTCACTGACAACGAGCGCTACTTTATCTCCCATGTGCTGGCCTTCTTCGCTG 388093 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | |||||||| || || || |||||||| | || || || ||||||||||| | Sbjct 388092 CCTCGGACGGCATTGTTAACGAGAATTTGGTCGAGCGCTTTAGTCAGGAGGTGCAGATCA 388033 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||| Sbjct 388032 CAGAGGCACGTTGCTTCTACGGCTTCCAGATAGCCATGGAGAATGTGCACTCCGAGATGT 387973 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 |||| || ||||| || || ||||| |||||| | ||| || || |||||||||| Sbjct 387972 ACAGCGTGCTCATTGACACCTACATACGGGAGCCGCAGGAGCGCGACTACTTGTTCAATG 387913 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | || ||||| || ||||| || ||||| || ||||| |||||| | ||||| || Sbjct 387912 CTATTGAGACCATGCCGGCTGTAAAGCGCAAGGCGGACTGGGCCATGTCCTGGATATCCT 387853 Query 61466 GTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 | | |||| | |||| || || | | || ||||||| || || || | || | Sbjct 387852 CGAAATCGGCCAACTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCT 387793 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 | ||||| |||||| | ||||||||| ||||||| ||||| || ||||||||||||| Sbjct 387792 TTAGTGGCAGCTTTGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTGA 387733 Query 61586 CCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGC 61645 ||||| ||| ||| |||| || || ||||| || | || || || ||||| | ||| Sbjct 387732 CCTTCTCCAACGAGCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGG---TGC 387676 Query 61646 TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTG 61705 | | | | | |||| ||| | || || | |||||| | ||||| | | | Sbjct 387675 TCATGTATCACCATCTAGTGCAGCGGCCCAAGCGGGAGCGCATCATCGAGATCATCAGGG 387616 Query 61706 AGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCA 61765 | || || ||||| ||||| || || ||||| || |||||||| | || |||| Sbjct 387615 ATGCTGTGGAAATCGAGCAGGAGTTCCTCACTGAAGCCCTGCCCGTCAATTTGATTGGCA 387556 Query 61766 TGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATT 61825 |||| |||| || ||||| ||||| || || || || ||||| || ||| | | || Sbjct 387555 TGAACTGTGTTCTCATGTCCCAGTACATCGAGTTCGTGGCCGATCGGCTGCTAGGGGAGC 387496 Query 61826 TGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGC 61885 | ||| || |||||| || || || || || || |||||||||| ||||| |||| Sbjct 387495 TCGGTGTGGGTAAGATCTACAACACTAAGAATCCTTTCAATTTCATGGAGATGATCTCGC 387436 Query 61886 TGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGTGT 61943 |||| || ||||| || || || ||||| || | ||| || || || ||||||| Sbjct 387435 TGGACGGAAAGACAAACTTCTTTGAGAAGAAGGTGGCCGAGTACCAGCGCATGGGTGT 387378 >seq1635 Length=10282868 Score = 284 bits (314), Expect = 1e-71 Identities = 1146/1792 (64%), Gaps = 31/1792 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| || || || || || || || || | || || | | ||| ||||| ||||| Sbjct 1117704 TCGACAGTAAATTGTATTGCGTTGGCGGCAGGTTTTGTGCGTAAATAATACATTCCGGTT 1117645 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| | | ||||| || |||| |||||| | || || ||||| Sbjct 1117644 TTTAGTCCAGCTTTCCAGGAGAAAAAATGTATGGATGTCAATTTTCCGTAGTTGGGCTCT 1117585 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || || || | ||| || |||||||| ||||| || | ||| | ||| |||||||| Sbjct 1117584 GCTACGTGAACATTAAATGACTGACTTTGATCAATAAATGCACCTCTATCAGCAGCCATT 1117525 Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT 65317 | ||| | | | || || ||||| || || || || || || |||| Sbjct 1117524 TTAATTGTGGATTTTACTGAAATTTCCCATACAGTTTTATAAAGATCGCGAACCTTTTGG 1117465 Query 65318 GGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGAC 65377 ||||| ||||| || || | || || | | | ||| || ||| |||| Sbjct 1117464 GGAATAGTTTCAATATCTTGAATGGAGCCCCTGCTGGAAATTATTTTATTTTTCATCTCA 1117405 Query 65378 TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAAC 65437 || ||| || |||| || | | || | || ||| |||||| ||||| || Sbjct 1117404 TCATCCCATAAGTCCAATTCTGTTAAATCCCTCAATAAATGATGATTGACCACTTGAAAT 1117345 Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497 || || || | ||| || | ||| || || | || ||||| || ||||| | Sbjct 1117344 TCACCAGATAATACTCGTCTCGTATAAATATTTGTGGTATATGGTTCGAATGATTCGTTA 1117285 Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557 || || | |||||| ||||||||||| || ||||| || || || ||||| || || | Sbjct 1117284 TTACCCATAATTTGTGCAGTAGATGCTGTAGGCATCGGCGCTACTAACAACGAATTCCTA 1117225 Query 65558 AATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCG 65617 | ||||| | ||| ||||| | || | ||| | ||| | |||| | | | Sbjct 1117224 ATTCCGTGCTTTTTAATGTCTTCCTTCAGGCTTTGCCAATCCCATA--GGTTCGTTG--G 1117169 Query 65618 ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAA 65677 | | | ||||||||| | ||| || |||| | || | || || | Sbjct 1117168 AGTTTTATC--CCACATATCATATTGTAGAATTCCCTTGCTCACAGGACTTCCTTCATAG 1117111 Query 65678 CTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAA 65737 | || || ||||| || | ||||||| ||| || | || || || |||||||| Sbjct 1117110 GTTTCATATACTCCAAATTCTTCAGCAAGTTCACAACTAGCTTCCAGAGCCCCAAAATAA 1117051 Query 65738 ATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCC 65797 || || || || || || | || | || || || ||||| || || || | || | Sbjct 1117050 ATTGTTTCAAATATTTGTTGGTTTAAAAGACCGGCTTCTTCGCTTTCATAGGGAAAACGC 1116991 Query 65798 ATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAA 65857 || | | |||| ||| || | ||||||||| || |||||||| |||||||| | ||| Sbjct 1116990 ATTAAAATTAAAGCGTCAGCTAAACCTTGAACACCTATACCGATTGGACGATGCCTTAAA 1116931 Query 65858 TTGGAACGTCTCGCCT-CAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 ||||| | ||| | || | || | ||||| || ||||| || ||||| || | ||| Sbjct 1116930 TTGGA-CTTCTTGGCTTCTGGCAAGGGGTAATAGTTGATGTCTATAATTTTGTTAAGATT 1116872 Query 65917 GCGTGTCACCACATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTTAGGACGA 65974 || || || | | ||| || |||| || ||||||| | ||| Sbjct 1116871 TT-TGGCAACAGTTTTG-GTTACTTCTTTTAATTTTTTGAAATCATACGTTTTT------ 1116820 Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 || || || || ||| || || || | || || | ||||||||||| Sbjct 1116819 TCTGGTGTTACGAACA---------TGTTCAGTGCTATGGAAGCTAAATTGCAGACAGCG 1116769 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 | ||| ||||| || | |||||||||||||| || || | ||||||||| |||||| Sbjct 1116768 ACCTCATCAGGTGCTGAGTACTCGACAATTTCTGTACATAAATTACTGCATTTAATGGTG 1116709 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 || | ||| |||||||| ||||| | ||| || | |||||| | | |||||| || | Sbjct 1116708 CCAACATTTTGTTGATTGCTCTTTCTATTACAGGAATCCTTAAAAAGCATGTATGGGTTA 1116649 Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGT 66214 || ||||| ||||| || || || || || ||| | ||| | || | ||| || || Sbjct 1116648 CCAGTCTCCACTTGCGATTCTATAATAGCAAACCATAAAGCCTGGGCTTCCACTGTTCGA 1116589 Query 66215 ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT 66274 ||| | |||| | || || | | ||||| | ||| || ||| ||||| || Sbjct 1116588 TTCGCACGTCCTTCTTGCTCATATTTGACATAGAGCTCTTCAAATTTTTCGCCCCAAACA 1116529 Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 || || | ||||| || ||||||||||||| |||||| ||| || ||| Sbjct 1116528 TCTTGAAGGCCAGGACATTTATGTGGACACATCAACGACCAGCTTTCATTTGCCTCAACA 1116469 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 || ||| || |||||||| ||||| || ||||| || ||||| ||||||| | || Sbjct 1116468 CGTTTCATGAAAAGATCAGGAATCCATAGAGCGTAAAAAAGATCACGTGCTCTGTTTTCT 1116409 Query 66395 TCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453 || | || ||| || || | | ||| | |||||||| | || | |||||| || || Sbjct 1116408 TCTTTTCCAGTGTTTCTTTTG-AGGTCTAAAAACTCAAAAACATCTGAATGCCAGGGCTC 1116350 Query 66454 CAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGAC 66513 | || || || || | || | ||| || || || || || || || || || || Sbjct 1116349 TAAATAAATAGCAAAGGCACCAGGTCTTTTTCCACCTCCCTGATCAACATATCGTGCCAC 1116290 Query 66514 ATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGAT 66573 ||| || || || | | ||| || || | || || || | || || || || || Sbjct 1116289 ATTATTAAAAACTCTTAGCATTGGAACTAATCCATTCGACGTACCGTTCGTTCCACATAT 1116230 Query 66574 GGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGA 66633 || | ||| || || || |||||||| || ||||| ||||| || | ||| || Sbjct 1116229 GGATGTGCCTTTAGCACGAATGCAATGAACATTAAGTCCAATTCCACCTGCTGACTTGGA 1116170 Query 66634 GATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGT 66693 || ||||| | | |||| || || || ||||| || || || || || Sbjct 1116169 AATCAGTGCACATTGTTCAACTGATTTAAAAATACCTTCAATTGAATCCGAATTCATTGT 1116110 Query 66694 CAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGT 66753 || || | ||||| | ||| ||| ||| || || | || || || || | Sbjct 1116109 CAAAAGAAAACATGAGGACAATTGAGGTCGATTTGTTGCAGCAGCAAAAAGCGTTGGCGA 1116050 Query 66754 AGCGTGCGTAAAGTAATGGCGAGACATGTA-ATTGTACGTCTCGATGACAGCATCAATGT 66812 || |||||||| || | ||||| ||| ||||| || || | | |||||||| | Sbjct 1116049 GGCATGCGTAAAATATCGTTCAGACA-GTAGGTTGTAAGTTTCCACTGCCGCATCAATAT 1115991 Query 66813 TTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 || |||||||| || || || |||||||| | || ||| || ||||| Sbjct 1115990 CGTCTCCATGAATACCAAGAGCGACGCGCATCAGCATGTGTTGTGGACGTTC 1115939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397505795268320