Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1058 127 4e-27
seq4392 123 5e-26
>seq1058
Length=23677
Score = 127 bits (140), Expect = 4e-27
Identities = 184/251 (73%), Gaps = 9/251 (4%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130
|||||||||| ||||||||||| | ||||||||| | ||| ||||| | ||||
Sbjct 1011 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 952
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188
|| ||||| |||| ||| | | ||||| ||| ||||||| || | | ||||||
Sbjct 951 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 893
Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||||| ||| ||||| | |||||| | ||||||||||||||||||
Sbjct 892 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 833
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||||||||| |||||||| || |||| ||||||||||||||||| |||||
Sbjct 832 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 774
Query 308 AAAGTTAGGGG 318
|||||||| ||
Sbjct 773 AAAGTTAGAGG 763
>seq4392
Length=38752
Score = 123 bits (136), Expect = 5e-26
Identities = 183/251 (73%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130
|||||||||| ||||||||||| | ||||||||| | ||| ||||| | ||||
Sbjct 3753 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 3812
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188
|| ||||| |||| ||| | | ||||| ||| ||||||| || | | ||||||
Sbjct 3813 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 3871
Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||||| ||| ||||| | | |||| | ||||||||||||||||||
Sbjct 3872 ATTAATAGAAGCAGTTTGGGGGCATTAATATTACGACGCGAGAGGTGAAATTCTTGGACC 3931
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||||||||| |||||||| || |||| ||||||||||||||||| |||||
Sbjct 3932 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 3990
Query 308 AAAGTTAGGGG 318
|||||||| ||
Sbjct 3991 AAAGTTAGAGG 4001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915156161920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |