Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20pseudoobscura_20pseudoobscura_20[refseq_20GCF_5F0000017
65.3_202013-04-11] 4,790 sequences; 152,696,384 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq4392 78.8 6e-13
seq961 73.4 2e-11
>seq4392
Length=38752
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 4711 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 4654
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 4653 TAAT-CAATGCGAG 4641
>seq961
Length=2017
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||| || ||||||||| ||||||||||| |||| |||||||||||||||
Sbjct 2002 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTCCAAAGGGCAGGGACG 1945
Query 109 TAATACAACGCAAG 122
|||| ||| || ||
Sbjct 1944 TAAT-CAATGCGAG 1932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300786492200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |