Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq7530 165 2e-38 >seq7530 Length=1125 Score = 165 bits (182), Expect = 2e-38 Identities = 253/361 (70%), Gaps = 15/361 (4%) Strand=Plus/Plus Query 2 GAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATA 61 ||| ||||| ||| || || | || || || |||||||||||||||||||||||||| Sbjct 697 GAAATTCGGGTCCTTCCGGAGAACGGGAAGAATATTCACGTTCGGCGAAGCCTTGGAATA 756 Query 62 CATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCC 121 ||||||||| |||||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct 757 CATGTAGCAGTCGTAACCGCTGCAATAGCCGCAGAAATTGCACGGTCCCATCTGCGCGCC 816 Query 122 ATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACC 181 ||| || ||||| || ||| || | ||||| | |||||| ||||| | || || Sbjct 817 ATACGGATTGGTATATTGCCGGGACGCGTTGGCGGCCGGCAGCGAATAGGGATGATACCC 876 Query 182 GACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGG---AGACGGTGTTTTTCTGCGATTC 238 ||||| |||| || || | || || | || | |||| || || ||| Sbjct 877 CGCCTCGTCAGCCGCCTTGCGGAAGAGATTGGCCGTATAGAC---GTCCTTTAGCGGAGG 933 Query 239 CAAGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCAC 298 || ||||| | ||| ||| |||||| || ||||||| | ||| || Sbjct 934 CAGCGGGAAATCATCGGAACGGGACGGGGCGAACACGTTGCCA---------TTGCCGAC 984 Query 299 CAACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTC 358 | || ||| ||||| | | |||| ||| || |||||||| || || || || | ||| Sbjct 985 GACCTTGCCGTTGACCTTGTAAGCCTCGCCCGATGTGCCGAACACCTTCTCGGCCTTGTC 1044 Query 359 G 359 | Sbjct 1045 G 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046161221984