Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq18703 93.3 5e-17 >seq18703 Length=1026 Score = 93.3 bits (102), Expect = 5e-17 Identities = 138/190 (73%), Gaps = 7/190 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| ||||| || | ||||||||| ||||||||||||| | ||| |||| Sbjct 544 AAACCAACGCAATAGAACCG-AGGTCCTATTCCATTATTCCATGCTCTGCTGTTCAGGCG 602 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 || |||||||||||||||| |||||| |||| ||||| || | || |||| ||| Sbjct 603 CGAGGCCTGCTTTGAACACTCCAATTTTTTCAAAGTAAACGTTCCGGCCTCTCCTGGCAC 662 Query 129 -CAATGAAGGCATACGGGC--TCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGT 185 |||| |||| ||||| ||| ||||| ||| | || | |||||| | |||| Sbjct 663 TCAATCAAGGGCACCGGGCGAAAACCGAGAGGAAGGCCAGG--ACTGCAGTGCACGCCTC 720 Query 186 GAGGCGGACC 195 |||||||| Sbjct 721 ACGGCGGACC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595068425646