Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq7388 174 4e-41 >seq7388 Length=1197 Score = 174 bits (192), Expect = 4e-41 Identities = 141/171 (82%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 ||||||| || ||| ||||||| |||||||| ||| |||||||||||||||||||||| | Sbjct 25 AGCCCCGGTAAATTTTCGGCGCAGAATCACTCGACTAGTGAGCTATTACGCACTCTTTAA 84 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 | | |||||||||| ||||||| |||| |||||||| |||||||||| ||||| |||| Sbjct 85 ATGGTGGCTGCTTCTGAGCCAACATCCTAGTTGTCTATGCAACTCCACCGCCTTTTCCAC 144 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || | |||||| ||||| ||| || ||||||||||| |||| ||| Sbjct 145 TTAGCATATATTTAGGGACCTTAACTGGTGGTCTGGGCTGTTCCCCTTTCG 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177331283456