Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq7370 104 5e-20 >seq7370 Length=2146 Score = 104 bits (114), Expect = 5e-20 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| |||||| |||||||||| |||||||| || |||||||||||||| |||||||| Sbjct 1332 CCAGCACCCATGTGTCCTTGGAACCACCGCCCTGGGACGAGTTGACGACGAGCGAGCCAC 1273 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCA 365 ||||||||||| |||| || ||| ||||| | | | || ||| |||| | || Sbjct 1272 GTTTCAGCGCCACACGGGACAGGCCGCCGGGAAGTACCCATGTGTCCCTGCCGGTGACGG 1213 Query 366 CGAAGGGTCGCA 377 ||||||| |||| Sbjct 1212 CGAAGGGGCGCA 1201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119744427200