Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1555 549 2e-151 seq1557 428 4e-115 >seq1555 Length=7220098 Score = 549 bits (608), Expect = 2e-151 Identities = 1192/1770 (67%), Gaps = 29/1770 (2%) Strand=Plus/Plus Query 65081 ACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTG 65140 || |||||||| || ||||| ||||| | |||||| | ||||||||||| ||||| || Sbjct 5750477 ACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATTCCGGTTTTA 5750536 Query 65141 AGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCC 65200 || || || ||| | || || || || || | | ||| |||| || ||||||||| Sbjct 5750537 AGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTTGGCTCGGCC 5750596 Query 65201 ACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCATGTC 65259 ||||| || || ||||||||||||||||| ||| |||| ||||||||| || ||||| | Sbjct 5750597 ACATGTATGTTGAACGACTGACTCTGATCTATG-AACGCACCACGATCGGCGGCCATTTT 5750655 Query 65260 AATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTG 65318 ||| | ||| | | || || ||||| || ||||| ||||| || |||| | Sbjct 5750656 AATCGTG-GACTTGACTGAGATTTCCCACACCGTCTTATACAGATCTCGCACCTTCTGGG 5750714 Query 65319 GAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACT 65378 | || |||||||| || | || || | | | || || | || ||| | Sbjct 5750715 GGATGGTCTCAATGTTTTGAATCGATCCCCTGCTGGATATGATCTGGTTCTTCATGTCGT 5750774 Query 65379 CTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACT 65438 | |||||| ||| ||| | || | | | ||| ||| | |||| || ||||| | Sbjct 5750775 CGTCCCACAAGTCCAGCTCGGTTAGGTCGCGCAACAAATGATGGTTGACCACCTGGAATT 5750834 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 |||||||||| || || ||| || ||||| | ||| ||| || ||||||||| ||| Sbjct 5750835 CGCCGGACAGAACTCGCCGGGTGTATATGTTCGTGGTGTAGGGCTCGAAGGATTCATTGT 5750894 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558 |||| | || || || ||||||||||| ||||||||||| || | || ||||| || | Sbjct 5750895 TGCCCATTATCTGAGCCGTAGATGCAGTGGGCATGGGAGCAACGAGCAGGGAGTTCCGGA 5750954 Query 65559 ATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGA 65618 |||| | | | |||| | ||||| | ||||| ||||| |||| ||| | Sbjct 5750955 CACCGTGCTTCTTAATGGACTCCTTCAATTTCTGCCAGTCCCACA--GGTT---CGTTGG 5751009 Query 65619 CATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAAC 65678 || || | |||||| || | |||| |||| | || |||| || | | Sbjct 5751010 CA-CCTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTCACCGGGCTGCCCTCGTAGG 5751068 Query 65679 TATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAA 65738 | ||||| | || || || ||| |||| ||||||| || | ||| || | |||| Sbjct 5751069 TTTCGTATGCACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCATAGTAAA 5751128 Query 65739 TGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCA 65798 |||| ||||| || | |||| | || || || ||||| |||||||| | || || Sbjct 5751129 TGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCTTCGCTTTCGTACGGGAAACGCA 5751188 Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858 | || | || | || || | || |||| ||||| || | |||||| || | ||||| Sbjct 5751189 TGAGAATCAAGGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGGTGCCTCAAAT 5751248 Query 65859 TGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGC 65918 |||| || ||||| || | || || || |||||||| || || || | ||| Sbjct 5751249 TGGACTTCCTTGCCTCCGGCAGGGGATAATAGTTGATATCAATTATCTTGTTTAGATTTT 5751308 Query 65919 GTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCG 65977 || || | | || | | | | || || |||||| | || || Sbjct 5751309 TGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTA-AAATCATACGTCTTC------TCC 5751361 Query 65978 GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATC 66037 || ||| || ||| ||| ||||| | || || | ||||||||| || ||| Sbjct 5751362 GGCGTGACGAACATG------TTG---AGGGCGATGGAGGCCAAGTTGCAGACTGCAATC 5751412 Query 66038 TCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCC 66097 || || || | || ||| || || ||||| ||||||| || ||||| ||||||||| Sbjct 5751413 TCATCCGGTGAGGAATATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCC 5751472 Query 66098 AAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCG 66157 | |||||| || || ||||| | ||||| || |||||| | | |||||||||| | ||| Sbjct 5751473 ACATTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCG 5751532 Query 66158 GTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACC 66217 ||||| ||||| | |||||||||||| ||| || | | ||||| ||||| || Sbjct 5751533 GTCTCCACTTGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTG 5751592 Query 66218 GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCG 66277 |||| ||| | | ||||| | ||||| || | |||||| || ||||| |||||| Sbjct 5751593 GCCCGACCCTCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACTTCG 5751652 Query 66278 GACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGA 66337 |||| ||||||||||| || ||||| |||||||||||||| | || || || Sbjct 5751653 TGGAGACCAGGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCAACGCGT 5751712 Query 66338 CGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCA 66397 ||| || ||||| |||||||| |||||||| || ||||||||||| || | ||| || Sbjct 5751713 TTCATGAAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCT 5751772 Query 66398 ATG-CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456 || ||||| || || || || ||||||||||||| || | ||||| ||||||| Sbjct 5751773 TTGCCCGTG-TTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAA 5751831 Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516 || ||||| || | || ||| |||||||| || || || || || || || ||||| Sbjct 5751832 ATAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCCACATAACGTGCCACATT 5751891 Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576 |||||||| | || ||| || || | ||| || || | ||||| |||||| || | Sbjct 5751892 ATTGAAGACCCTCAGCATGGGAACCAACCCATTGGAAGTACCATTTGTGCCGCAAATCGA 5751951 Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 || || ||| || || || || || || || || |||||||| | ||| ||||| Sbjct 5751952 GGTGCCCTTTGCACGAATGCAATGCACGTTGAGTCCGATGCCACCGGCGGACTTGGAGAT 5752011 Query 66637 GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAG 66696 || || | |||| | | ||| ||||| || |||||||| | | |||||||| Sbjct 5752012 CATGGCGCATTGTTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAG 5752071 Query 66697 GAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGC 66756 ||| | || || | || || | |||||| || | || || ||||| | || Sbjct 5752072 AAGGAAACACGACGACAACTGCGGCCGGTTTGTGGCAGCGGCAAACAGTGTGGGCGATGC 5752131 Query 66757 GTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTC 66816 ||||| ||||| | |||| ||| || || || | | | ||||| || | || Sbjct 5752132 ATGCGTGAAGTAGCGCTCCGACAGAAGATTATAGGTTTCCACGGCCGCATCGATATCCTC 5752191 Query 66817 GCCATGAATCCCGAGTGCACATCGCATCAG 66846 ||||| || |||| ||| |||||||| Sbjct 5752192 TCCATGGATTCCGATCGCAACGCGCATCAG 5752221 >seq1557 Length=14215200 Score = 428 bits (474), Expect = 4e-115 Identities = 585/812 (72%), Gaps = 11/812 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || ||||| |||||||| || |||||||| ||||||||||| ||| | | ||||| Sbjct 5422487 AGGCTGAGGCTTCTTTCTGGACCGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGACT 5422428 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || | | || || | |||||||| || ||| |||| ||||| |||| Sbjct 5422427 GGCACCGCCTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 5422368 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || || ||||| || ||||| | |||| || ||| ||||||||||| | Sbjct 5422367 CCTCTGATGGCATCGTAAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 5422308 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 ||||||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct 5422307 CGGAGGCACGATGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 5422248 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 |||||||| | ||||| || |||||| |||| | | || || ||||||| | Sbjct 5422247 ACAGTGTTTTGATCGACACTTACATCCGGGATCCACACCAGCGAGAGTACCTGTTCAACG 5422188 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | ||||| ||||| ||||| |||||||| || || || |||||| | |||||| | Sbjct 5422187 CTATCGAAACGATGCCGGCTGTGAAGCGCAAGGCAGACTGGGCCCTGTCCTGGATCTC-- 5422130 Query 61466 GTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | ||| |||| | || || || || | | || ||||| | || ||||| | || Sbjct 5422129 ATCCAAGTCGGCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATTTT 5422070 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||||| || || ||| | || || ||| | ||||| || || || ||||| || | Sbjct 5422069 CTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTTAAGAAGCGCGGTCTGATGCCTGGATT 5422010 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 ||||||| ||| ||| |||| || |||||||||||| |||| || || ||||| || | Sbjct 5422009 GACCTTCTCCAACGAGCTGATCTCTCGCGACGAGGGCTTGCACTGCGACTTTGCCGTGCT 5421950 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCG 61703 | | ||| | | | |||||| | || || | ||||| | ||||| | || Sbjct 5421949 GATGTTCCAGC---ACCTGGTGCAGCGACCCAAGCGCGAGCGCATCATCGAGATCATCCG 5421893 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGG 61763 || ||||| | || || ||||| || || || || || |||||||| | ||||| Sbjct 5421892 CGACGCGGTGGCCATAGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTCAATTTGATCGG 5421833 Query 61764 CATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||||| | || ||||| ||||| ||||| || || || |||||| || | || || Sbjct 5421832 CATGAATTGCGACCTGATGTCCCAGTACATTGAGTTCGTAGCGGACCGTTTGCTCGTGGA 5421773 Query 61824 TTTGG--GTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881 |||| || ||| |||||| || || |||||||||||| | |||||||| ||||| Sbjct 5421772 GTTGGGCGTTGGAA--AGATCTACAACACCAAAAACCCATTTAACTTCATGGAGATGATA 5421715 Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||||| || ||||| || ||||||||||| Sbjct 5421714 TCGCTGGACGGAAAGACCAACTTTTTCGAGAA 5421683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397496623001840