Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1558 89.7 2e-12 >seq1558 Length=21120651 Score = 89.7 bits (98), Expect = 2e-12 Identities = 116/156 (74%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| ||||||||||| || || | | | |||||||||||||| || || ||| ||| Sbjct 12061547 ACCAATTGTCATACGAGATGGGATAGCGTGGGGGTTGATGATGATATCGGGTGCCAAGCC 12061606 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGAGGA-AC-GATGAGACCAATGGTTCCCTTTTGC 364540 || ||| |||| ||||||||| || || || || | || ||||||||||| Sbjct 12061607 CTCGCAGGTGAAGGCCATATCTTCTTGACGATACTGA--ATTCCGCACGTTCCCTTTTGT 12061664 Query 364541 GCATAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | | |||||||| ||||||||||| || ||||| Sbjct 12061665 CCGTGACGAGAAGCGAACTTGTCGCCGAT--CTGGG 12061698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884530644773783