Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq762 215 1e-53 seq736 196 9e-48 seq1353 188 1e-45 seq1352 188 1e-45 seq1349 188 1e-45 seq1334 188 1e-45 seq7 188 1e-45 seq25 185 2e-44 seq1350 163 6e-38 >seq762 Length=13283 Score = 215 bits (238), Expect = 1e-53 Identities = 250/332 (75%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| ||||||||||| ||||||||| Sbjct 8817 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGACGCCTACAAGCAGTCGGAGCCTCT 8759 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || |||| || Sbjct 8758 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCAAG 8701 Query 124 GTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTT 182 ||||| | || || ||| || || ||||||||| || || ||||||||||||| Sbjct 8700 CTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGACGAGTT 8646 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | |||| |||| ||||||| |||||||| ||| | |||||||||| |||||||| Sbjct 8645 GCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGTTGAAGGTGCGGTAACA 8586 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 || |||||||||||||| |||||||| | |||||| | || |||||| Sbjct 8585 CGCACTGGAGGACCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGTTAGGGG 8526 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| ||| |||||| || Sbjct 8525 TGAAAGGCCAATCAAACTCGGAGATAGCTGGT 8494 >seq736 Length=32925 Score = 196 bits (216), Expect = 9e-48 Identities = 251/334 (75%), Gaps = 18/334 (5%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| ||||||||||| ||||||||| Sbjct 29656 CCCGACGAGGGGAGTGAAA-AGACC-TGAAACCGGACGCCTACAAGCAGTCGGAGCCTCT 29599 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || |||| || Sbjct 29598 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCAAG 29541 Query 124 GTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTT 182 ||||| | || || ||| || || ||||||||| || || ||||||||||||| Sbjct 29540 CTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGACGAGTT 29486 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| Sbjct 29485 GCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGG-TGAAGGTGCGGTAACA 29427 Query 243 CGTGATGGAGGACCGAACCGGTAAAC--GTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300 || |||||||||||||| | | |||||||| | |||||| | || |||| Sbjct 29426 CGCACTGGAGGACCGAACC---ACGCCTGTTGAAAA-AGTCGGGATGAGCTGTGGCTAGG 29371 Query 301 GGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||||| || ||||||| || Sbjct 29370 GGTGAAAGGCCAATCAAACTCGG-AATAGCTGGT 29338 >seq1353 Length=15711 Score = 188 bits (208), Expect = 1e-45 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 4409 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 4351 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 4350 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 4293 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 4292 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 4237 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 4236 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 4177 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 4176 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 4117 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 4116 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 4086 >seq1352 Length=32338 Score = 188 bits (208), Expect = 1e-45 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 24330 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 24272 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 24271 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 24214 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 24213 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 24158 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 24157 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 24098 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 24097 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 24038 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 24037 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 24007 >seq1349 Length=20638 Score = 188 bits (208), Expect = 1e-45 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 7226 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 7284 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 7285 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 7342 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 7343 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 7398 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 7399 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 7458 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 7459 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 7518 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 7519 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 7549 >seq1334 Length=31116 Score = 188 bits (208), Expect = 1e-45 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 9959 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 10017 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 10018 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 10075 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 10076 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 10131 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 10132 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 10191 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 10192 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 10251 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 10252 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 10282 >seq7 Length=30121 Score = 188 bits (208), Expect = 1e-45 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 15296 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 15238 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 15237 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 15180 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 15179 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 15124 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 15123 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 15064 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 15063 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 15004 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 15003 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 14973 >seq25 Length=66545 Score = 185 bits (204), Expect = 2e-44 Identities = 244/331 (74%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| |||||||||| ||||||||| Sbjct 56071 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCT 56013 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 56012 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 55955 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||| Sbjct 55954 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTG 55899 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 55898 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 55839 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 55838 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCG-GGATGAGCTGTGGCTAGGGGT 55780 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| ||| |||||| || Sbjct 55779 GAAAGGCCAATCAAACTCGGAGATAGCTGGT 55749 >seq1350 Length=24878 Score = 163 bits (180), Expect = 6e-38 Identities = 235/322 (73%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGT 72 ||| |||||| ||||| |||| ||| |||||||||| ||||||||| | | ||| Sbjct 2193 GGGAGTGAAAGAGACC-TGAAACCGGATGCCTACAAGCAGTCGGAGCCTCTTA--TGGGT 2249 Query 73 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGC 132 |||||||| ||||| | |||||| | | |||||| | || ||||||| ||||| Sbjct 2250 GACGGCGTACCTTT-GTATAATG-GTCAGCGAGTTTCT-GTTTGCAGCGAGCTTAAGCCG 2306 Query 133 TTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTA 192 | ||| ||| || || ||||||||| || || |||||| ||||| |||| | Sbjct 2307 AT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTGCTGGCAGAA 2362 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||| ||||||| |||||||| ||| | |||| ||||| |||||||| || ||||| Sbjct 2363 GACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACACGCACTGGAG 2422 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 | ||||||| |||||||| | |||||| | || |||||||||||||||| Sbjct 2423 GGCCGAACCCACGCCTGTTGAAAAAGTCG-GGATGAGCTGTGGCTAGGGGTGAAAGGCCA 2481 Query 313 ATCAAACTGGGAAATAGCTCGT 334 |||||||| ||| |||||| || Sbjct 2482 ATCAAACTCGGAGATAGCTGGT 2503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972786808832