Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1353 159 5e-37 seq1352 159 5e-37 seq1349 159 5e-37 seq1334 159 5e-37 seq25 159 5e-37 seq7 159 5e-37 seq736 150 2e-34 seq762 147 3e-33 seq1350 143 4e-32 >seq1353 Length=15711 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 3159 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 3217 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 3218 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 3270 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 3271 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 3326 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 3327 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 3386 Query 240 TTTACGGTA 248 ||| |||| Sbjct 3387 TTTCGGGTA 3395 >seq1352 Length=32338 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 23079 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 23137 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 23138 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 23190 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 23191 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 23246 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 23247 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 23306 Query 240 TTTACGGTA 248 ||| |||| Sbjct 23307 TTTCGGGTA 23315 >seq1349 Length=20638 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 8476 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 8418 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 8417 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 8365 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 8364 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 8309 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 8308 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 8249 Query 240 TTTACGGTA 248 ||| |||| Sbjct 8248 TTTCGGGTA 8240 >seq1334 Length=31116 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 11208 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 11150 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 11149 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 11097 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 11096 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 11041 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 11040 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 10981 Query 240 TTTACGGTA 248 ||| |||| Sbjct 10980 TTTCGGGTA 10972 >seq25 Length=66545 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 54822 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 54880 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 54881 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 54933 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 54934 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 54989 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 54990 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 55049 Query 240 TTTACGGTA 248 ||| |||| Sbjct 55050 TTTCGGGTA 55058 >seq7 Length=30121 Score = 159 bits (176), Expect = 5e-37 Identities = 187/249 (75%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 14045 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTTC-GACTTCGCAG 14103 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| |||| || || Sbjct 14104 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGC------CACCCGC-CA 14156 Query 121 ACACGTCGTTCACCAGCAGTGGCACCC-CTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| |||||||||||| | || |||||| | Sbjct 14157 A----TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 14212 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 14213 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 14272 Query 240 TTTACGGTA 248 ||| |||| Sbjct 14273 TTTCGGGTA 14281 >seq736 Length=32925 Score = 150 bits (166), Expect = 2e-34 Identities = 185/249 (74%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| |||| || ||||||| Sbjct 28416 CTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTA-CGACTTCGCAG 28474 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| || ||||| || || Sbjct 28475 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTG------CCACCCGC-CA 28527 Query 121 ACACGTCGTTCACCAGCAGTGGCAC-CCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| | || | | || |||||||||||| | | |||||| | Sbjct 28528 A----TGGTTGCCCACTAACGGGTCTCGTTTATCCCGAAGTTACACGAGTAATTTGCCTA 28583 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 28584 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 28643 Query 240 TTTACGGTA 248 ||| |||| Sbjct 28644 TTTCGGGTA 28652 >seq762 Length=13283 Score = 147 bits (162), Expect = 3e-33 Identities = 182/248 (73%), Gaps = 11/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| || | | ||||||| Sbjct 7570 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTCTC-GACTTCGCAG 7628 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| ||| | || Sbjct 7629 AGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTCTGTGCCACC--------CGCA 7680 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || | ||| || || | ||| ||||||||||||| | | |||||| | Sbjct 7681 AATGGTTGCCCAC--TCACGGGTCTCGCTTATCCCGAAGTTACGCGAGTAATTTGCCTAG 7738 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | || |||| | | | |||||| |||| ||||||| | |||||||||||||| Sbjct 7739 TTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATGCTCTACCAGTCCACCTGTGTCGGT 7798 Query 241 TTACGGTA 248 ||| |||| Sbjct 7799 TTAGGGTA 7806 >seq1350 Length=24878 Score = 143 bits (158), Expect = 4e-32 Identities = 185/249 (74%), Gaps = 16/249 (6%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||| || ||||||| Sbjct 3423 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTT-TCGACTTCGCAG 3365 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| || |||| || || Sbjct 3364 AGTCCTGTGTTTTTAATAAACAGTCGCTACCC-CTGGTCTGTG-------CACCCGC-CA 3314 Query 121 ACACGTCGTTCACCAGCAGTGGCAC-CCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | ||| ||| || || | | ||| | |||||||||| | || |||||| | Sbjct 3313 A----TGGTTGCCCACCAACGGGTCTCGCTTAT-CCGAAGTTACACGAGCAATTTGCCTA 3259 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||||||||||| | ||||||||||||| Sbjct 3258 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCTGTGTCGG 3199 Query 240 TTTACGGTA 248 ||| |||| Sbjct 3198 TTTCGGGTA 3190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694390878188