Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq736 86.0 7e-15 seq1353 84.2 2e-14 seq1352 84.2 2e-14 seq1349 84.2 2e-14 seq1334 84.2 2e-14 seq25 84.2 2e-14 seq7 84.2 2e-14 seq1350 80.6 3e-13 seq762 75.2 1e-11 >seq736 Length=32925 Score = 86.0 bits (94), Expect = 7e-15 Identities = 128/179 (72%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 28646 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 28587 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAA-GGGTCCC--TA----CCCAGAAAT 137 ||||||||||| | | ||||||||||||||||| | | ||| || | | | | Sbjct 28586 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAACGAGACCCGTTAGTGGGCAACCATT 28527 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || || ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 28526 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 28468 >seq1353 Length=15711 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 3389 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 3330 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 3329 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 3296 >seq1352 Length=32338 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 23309 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 23250 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 23249 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 23216 >seq1349 Length=20638 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 8246 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 8305 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 8306 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 8339 >seq1334 Length=31116 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 10978 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 11037 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 11038 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 11071 >seq25 Length=66545 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 55052 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 54993 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 54992 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 54959 >seq7 Length=30121 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 14275 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 14216 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||||||| Sbjct 14215 AACTAGGCAAATTGCTCGTGTAACTTCGGGATAA 14182 >seq1350 Length=24878 Score = 80.6 bits (88), Expect = 3e-13 Identities = 127/178 (71%), Gaps = 8/178 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 3196 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 3255 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| || | ||||||||| |||||| | | ||| | || || Sbjct 3256 AACTAGGCAAATTGCTCGTGTAACTTC-GGATAAGCGAGACCCGTTGGTGGGCAACCATT 3314 Query 139 GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| | || |||||||| ||||||||||| || ||| || Sbjct 3315 GGCGGGTGCACAGACCAGGGGTA-GCGACTGTTTATTAAAAACACAGGACTCTGCGAA 3371 >seq762 Length=13283 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 7800 AAACCGACACAGGTGGACTGGTAGAGCATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 7741 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| | | ||||||||||||||| Sbjct 7740 AACTAGGCAAATTACTCGCGTAACTTCGGGATAA 7707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531193022024