Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1353 125 7e-27 seq1352 125 7e-27 seq1349 125 7e-27 seq1334 125 7e-27 seq25 125 7e-27 seq7 125 7e-27 seq1350 122 8e-26 seq762 122 8e-26 seq736 107 2e-21 >seq1353 Length=15711 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 3268 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 3209 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 3208 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 3160 >seq1352 Length=32338 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 23188 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 23129 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 23128 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 23080 >seq1349 Length=20638 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 8367 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 8426 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 8427 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 8475 >seq1334 Length=31116 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 11099 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 11158 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 11159 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 11207 >seq25 Length=66545 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 54931 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 54872 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 54871 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 54823 >seq7 Length=30121 Score = 125 bits (138), Expect = 7e-27 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 14154 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAGT 14095 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 14094 CGAAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 14046 >seq1350 Length=24878 Score = 122 bits (134), Expect = 8e-26 Identities = 78/85 (92%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || |||||| |||||||||||| ||| Sbjct 3338 GCGACTGTTTATTAAAAACACAGGACTCTGCGAAGTCGAAAGACGACGTATAGGGTCTGA 3397 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||||||||||| Sbjct 3398 CGCCTGCCCGGTGCCGGAAGGTTAA 3422 >seq762 Length=13283 Score = 122 bits (134), Expect = 8e-26 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 43 TGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAAC 102 ||| ||| | | | |||||| | ||||||||||||||||||||||| ||||||| || Sbjct 7680 TGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCGAAG 7621 Query 103 ACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || |||||||||||| |||||||||||||||||||||||||||| Sbjct 7620 TCGAGAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 7571 >seq736 Length=32925 Score = 107 bits (118), Expect = 2e-21 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 44 GCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACA 103 || ||| | | | |||||| | ||||||||||| ||||||||||| |||||| || Sbjct 28525 GCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGT 28466 Query 104 CGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 28465 CGTAAGACGACGTATAGGGCCTGACGCCTGCCCGGTGCCGGAAGGTTAA 28417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476793736636