Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq1353 163 6e-38
seq1352 163 6e-38
seq1350 163 6e-38
seq1349 163 6e-38
seq1334 163 6e-38
seq736 163 6e-38
seq25 163 6e-38
seq7 163 6e-38
seq762 152 1e-34
>seq1353
Length=15711
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2802 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 2743
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 2742 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 2683
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 2682 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 2623
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 2622 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 2573
>seq1352
Length=32338
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 22722 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 22663
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 22662 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 22603
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 22602 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 22543
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 22542 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 22493
>seq1350
Length=24878
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3778 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 3837
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 3838 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 3897
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 3898 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 3957
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 3958 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 4007
>seq1349
Length=20638
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 8833 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 8892
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 8893 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 8952
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 8953 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 9012
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 9013 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 9062
>seq1334
Length=31116
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 11565 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 11624
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 11625 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 11684
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 11685 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 11744
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 11745 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 11794
>seq736
Length=32925
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 28059 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 28000
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 27999 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 27940
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 27939 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 27880
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 27879 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 27830
>seq25
Length=66545
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 54465 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 54406
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 54405 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 54346
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 54345 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 54286
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 54285 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 54236
>seq7
Length=30121
Score = 163 bits (180), Expect = 6e-38
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
|||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 13688 CGGGACCCTGTATGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGG 13629
Query 170 CGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
||| | | | | ||||| || ||||||| | ||||||| |||| |||
Sbjct 13628 CGCGCGATGGTGGGCTCAGGCCGGTCGGAAACCGGCTGTTGAGTGCAATGGCATAAGCCC 13569
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| ||||||||| | || || ||||| |||||||||||| | || |||||||| ||
Sbjct 13568 GCCTGACTGCGAGAGTGACAGCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGG 13509
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 13508 TCCCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTAGGGATA 13459
>seq762
Length=13283
Score = 152 bits (168), Expect = 1e-34
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||||||||||||||||||||||||||||||||| ||||||||||||| | | | | ||
Sbjct 7197 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGTGTAACGGAGGCGCGCGATGGTGGGCT 7138
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| || ||||||| | ||||||| |||| ||| | |||||| || |
Sbjct 7137 CAGGCCGGTCGGAAACCGGCTGTCGAGTGCAATGGCATAAGCCCGCCTGACTGTGAGAGT 7078
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|| || | ||| |||||||||||| | || |||||||| ||| | | ||||| |||
Sbjct 7077 GACAGCTCGATCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGCGTGGAAGGGC 7018
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| ||||||||||| ||| || ||||||
Sbjct 7017 CATCGCTCAACGGATAAAAGGTACTCTAGGGATA 6984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982386678656
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |