Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1353 300 3e-79 seq1352 300 3e-79 seq1349 300 3e-79 seq1334 300 3e-79 seq762 300 3e-79 seq736 300 3e-79 seq25 300 3e-79 seq7 300 3e-79 >seq1353 Length=15711 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 6685 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 6742 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 6743 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 6802 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 6803 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 6862 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 6863 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 6910 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 6911 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 6968 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 6969 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 7005 >seq1352 Length=32338 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 26608 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 26665 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 26666 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 26725 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 26726 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 26785 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 26786 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 26833 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 26834 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 26891 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 26892 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 26928 >seq1349 Length=20638 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 4948 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 4891 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 4890 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 4831 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 4830 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 4771 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 4770 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 4723 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 4722 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 4665 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 4664 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 4628 >seq1334 Length=31116 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 7682 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 7625 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 7624 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 7565 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 7564 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 7505 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 7504 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 7457 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 7456 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 7399 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 7398 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 7362 >seq762 Length=13283 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||||||| |||||||| |||||||||||||||| |||||||||| |||| ||| Sbjct 11090 CTTTACAATCCGAAAACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTTCCCCC 11147 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 11148 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 11207 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||| |||||||||| ||| ||||| || Sbjct 11208 TGTGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 11267 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| || |||||| || | || | ||| | | ||| Sbjct 11268 CCAACAAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTGCGC---CTT 11315 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| |||||||||||| ||| Sbjct 11316 TGACCCTCAGGTATCATGCGGTATTAGCTCCAGTTTCCCGGAGTTATCCCCCAC--CCAT 11373 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| || ||||||||||||||||| || Sbjct 11374 GGATAGATTCCTACGCGTTACTCACCCGTCCGCCACT 11410 >seq736 Length=32925 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||||||| |||||||| |||||||||||||||| |||||||||| |||| ||| Sbjct 31911 CTTTACAATCCGAAAACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTTCCCCC 31968 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 31969 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 32028 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||| |||||||||| ||| ||||| || Sbjct 32029 TGTGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 32088 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| || |||||| || | || | ||| | | ||| Sbjct 32089 CCAACAAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTGCGC---CTT 32136 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| |||||||||||| ||| Sbjct 32137 TGACCCTCAGGTATCATGCGGTATTAGCTCCAGTTTCCCGGAGTTATCCCCCAC--CCAT 32194 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||||| || ||||||||||||||||| || Sbjct 32195 GGATAGATTCCTACGCGTTACTCACCCGTCCGCCACT 32231 >seq25 Length=66545 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 58285 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 58342 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 58343 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 58402 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 58403 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 58462 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 58463 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 58510 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 58511 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 58568 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 58569 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 58605 >seq7 Length=30121 Score = 300 bits (332), Expect = 3e-79 Identities = 272/337 (81%), Gaps = 18/337 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||||| |||||||||| || | ||| Sbjct 17574 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCATTG-CTGGATCAGGGTTGCCCCC 17631 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 17632 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 17691 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||| ||||| || |||| |||||||||| ||| ||||| || Sbjct 17692 TGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCA 17751 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || |||||| || | || | ||| | | ||| Sbjct 17752 CCAACTAGCTAATCAAACGCAGGCTCCTC------CACAGG---CGACTTACGC---CTT 17799 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299 | ||| ||| ||||||||||||| | |||||| | |||||||||||| ||| Sbjct 17800 TGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGTGTTATCCCCCAC--CCAT 17857 Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | |||| |||| || ||||||||||||||||| || Sbjct 17858 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT 17894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071985463680