Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq762 194 3e-47 seq736 194 3e-47 seq1353 187 5e-45 seq1352 187 5e-45 seq1349 187 5e-45 seq1334 187 5e-45 seq25 187 5e-45 seq7 187 5e-45 >seq762 Length=13283 Score = 194 bits (214), Expect = 3e-47 Identities = 227/307 (74%), Gaps = 15/307 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 11122 GGCATTGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 11181 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 11182 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATTGAT 11241 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||| | |||||| ||| || | || Sbjct 11242 CATCGCCTTGGTAGGCCTTTACCCCACCAACAAGCTAATCAAACGCAGGCTCCTCCACAG 11301 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||| ||| | | | | |||| | || ||||||||||||| Sbjct 11302 GCGA-----CTTGCGCC---------TTTGACCCTCAGGTATCATGCGGTATTAGCTCCA 11347 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| ||||| || | | | | || || || ||| ||||||||||||||||| Sbjct 11348 GTTTCCCGGAGTTATCCCCCACCCATGGATAGATTCCT-ACGCGTTACTCACCCGTCCGC 11406 Query 301 CACTAAG 307 ||||||| Sbjct 11407 CACTAAG 11413 >seq736 Length=32925 Score = 194 bits (214), Expect = 3e-47 Identities = 227/307 (74%), Gaps = 15/307 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 31943 GGCATTGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 32002 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 32003 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATTGAT 32062 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||| | |||||| ||| || | || Sbjct 32063 CATCGCCTTGGTAGGCCTTTACCCCACCAACAAGCTAATCAAACGCAGGCTCCTCCACAG 32122 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||| ||| | | | | |||| | || ||||||||||||| Sbjct 32123 GCGA-----CTTGCGCC---------TTTGACCCTCAGGTATCATGCGGTATTAGCTCCA 32168 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| ||||| || | | | | || || || ||| ||||||||||||||||| Sbjct 32169 GTTTCCCGGAGTTATCCCCCACCCATGGATAGATTCCT-ACGCGTTACTCACCCGTCCGC 32227 Query 301 CACTAAG 307 ||||||| Sbjct 32228 CACTAAG 32234 >seq1353 Length=15711 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 6717 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 6776 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 6777 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 6836 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 6837 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 6896 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 6897 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 6940 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 6941 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 6999 Query 299 GCCACTAAG 307 ||||||||| Sbjct 7000 GCCACTAAG 7008 >seq1352 Length=32338 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 26640 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 26699 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 26700 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 26759 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 26760 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 26819 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 26820 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 26863 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 26864 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 26922 Query 299 GCCACTAAG 307 ||||||||| Sbjct 26923 GCCACTAAG 26931 >seq1349 Length=20638 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 4916 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 4857 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 4856 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 4797 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 4796 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 4737 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 4736 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 4693 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 4692 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 4634 Query 299 GCCACTAAG 307 ||||||||| Sbjct 4633 GCCACTAAG 4625 >seq1334 Length=31116 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 7650 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 7591 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 7590 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 7531 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 7530 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 7471 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 7470 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 7427 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 7426 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 7368 Query 299 GCCACTAAG 307 ||||||||| Sbjct 7367 GCCACTAAG 7359 >seq25 Length=66545 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 58317 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 58376 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 58377 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 58436 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 58437 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 58496 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 58497 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 58540 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 58541 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 58599 Query 299 GCCACTAAG 307 ||||||||| Sbjct 58600 GCCACTAAG 58608 >seq7 Length=30121 Score = 187 bits (206), Expect = 5e-45 Identities = 226/309 (73%), Gaps = 19/309 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 17606 GGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 17665 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 17666 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTATTGAT 17725 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| ||| ||| | ||||||||| |||||| ||| || | || Sbjct 17726 CATCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAAACGCAGGCTCCTCCACAG 17785 Query 181 GCGA--TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGT 238 |||| || ||||| | |||| | | ||||||||||||| Sbjct 17786 GCGACTTACGCCTTTG----------------ACCCTCAGGTGTCATGCGGTATTAGCAC 17829 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| | ||||| || | | | | || | || ||| ||||||||||||||| Sbjct 17830 CAGTTTCCCAGTGTTATCCCCCACCCATGGATAGATACCT-ACGCGTTACTCACCCGTCC 17888 Query 299 GCCACTAAG 307 ||||||||| Sbjct 17889 GCCACTAAG 17897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998386461696