Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq762 223 6e-56 seq1352 221 2e-55 seq1349 221 2e-55 seq1334 221 2e-55 seq736 221 2e-55 seq7 221 2e-55 seq25 217 2e-54 seq1353 214 3e-53 seq1350 197 2e-48 >seq762 Length=13283 Score = 223 bits (246), Expect = 6e-56 Identities = 224/290 (77%), Gaps = 1/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 10774 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 10833 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 10834 TCTTCCCAATATCTACGAATTTCACCTCTACACT-GGAATTCCACAACCCTCTCTCACAC 10892 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 10893 TCTAGTCTGGACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 10952 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 10953 GTCCAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 11012 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 11013 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTGCGGGTA 11062 >seq1352 Length=32338 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 26291 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 26350 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 26351 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 26410 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 26411 TCTAGTCTGCACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 26470 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 26471 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 26530 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 26531 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 26580 >seq1349 Length=20638 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 5265 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 5206 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 5205 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 5146 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 5145 TCTAGTCTGCACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 5086 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 5085 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 5026 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 5025 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 4976 >seq1334 Length=31116 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 7999 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 7940 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 7939 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 7880 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 7879 TCTAGTCTGCACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 7820 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 7819 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 7760 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 7759 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 7710 >seq736 Length=32925 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 31594 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 31653 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| ||||||| |||||| ||| Sbjct 31654 TCTTCCCAATATCTACGAATTTCACCTCTACACTGAGAATTCCACAACCCTCTCTCACAC 31713 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 31714 TCTAGTCTGGACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 31773 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 31774 GTCCAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 31833 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 31834 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTGCGGGTA 31883 >seq7 Length=30121 Score = 221 bits (244), Expect = 2e-55 Identities = 223/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 17257 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 17316 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 17317 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 17376 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 17377 TCTAGTCTGCACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 17436 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 17437 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 17496 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 17497 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 17546 >seq25 Length=66545 Score = 217 bits (240), Expect = 2e-54 Identities = 223/290 (77%), Gaps = 1/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 57969 CCCACGCTTTCGCGCCTCAGCGTCAGTATGAG-CCAGGTTGCCGCCTTCGCCACCGGTGT 58027 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 58028 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 58087 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| |||| ||||| | |||||||||||||| Sbjct 58088 TCTAGTCTGCACGTATCAAATGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 58147 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 58148 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 58207 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 58208 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 58257 >seq1353 Length=15711 Score = 214 bits (236), Expect = 3e-53 Identities = 222/290 (77%), Gaps = 1/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 6369 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGCCTTCGCCACCGGTGT 6428 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| |||||| ||| Sbjct 6429 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACAACCCTCTCTCACAC 6488 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||| ||||| |||| ||||| | |||||||||||||| Sbjct 6489 TCTAGTCTGCACGTATCAA-TGCAGCTCCCAGGTTAAGCCCGGGGATTTCACATCTGACT 6547 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 6548 GTACAAACCGCCTACACGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 6607 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 6608 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 6657 >seq1350 Length=24878 Score = 197 bits (218), Expect = 2e-48 Identities = 224/290 (77%), Gaps = 9/290 (3%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| |||| |||||||| ||||| Sbjct 321 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAGCCAGGTTGCCGC-TTCGCCAC-GGTGT 264 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| | |||||| ||| Sbjct 263 TCTTCC--ATATCTACGAATTTCACCTCTACACT-GGAATTCC-ACACCCTCTCTCACAC 208 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||||||| || |||| ||||| | |||||||||||||| Sbjct 207 TCTAGTCTGCACGTATCAAATGCAG-CTCCAGGTTAAGCCCGGGGATTTCACATCTGACT 149 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | ||||||||||||| ||||| |||| | | |||| |||||| ||| ||| || Sbjct 148 GTACAAACCGCCTACACGCC-TTTACGCCCAGTCATTCCGAGCAACGCTAGCC-CCTTCG 91 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 90 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTACGGGTA 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828789112676