Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1353 306 6e-81 seq1352 306 6e-81 seq1350 306 6e-81 seq1349 306 6e-81 seq1334 306 6e-81 seq762 306 6e-81 seq736 306 6e-81 seq25 306 6e-81 seq7 306 6e-81 >seq1353 Length=15711 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 2249 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 2308 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 2309 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 2368 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 2369 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 2428 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 2429 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 2488 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 2489 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 2522 >seq1352 Length=32338 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 22169 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 22228 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 22229 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 22288 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 22289 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 22348 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 22349 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 22408 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 22409 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 22442 >seq1350 Length=24878 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 4330 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 4271 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 4270 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 4211 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 4210 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 4151 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 4150 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 4091 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 4090 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 4057 >seq1349 Length=20638 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 9386 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 9327 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 9326 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 9267 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 9266 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 9207 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 9206 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 9147 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 9146 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 9113 >seq1334 Length=31116 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 12118 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 12059 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 12058 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 11999 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 11998 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 11939 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 11938 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 11879 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 11878 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 11845 >seq762 Length=13283 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 6660 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCATACTTAGCTACCCGG 6719 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 || ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 6720 CTGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 6779 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 6780 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 6839 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 6840 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 6899 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 6900 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 6933 >seq736 Length=32925 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 27506 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 27565 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 27566 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 27625 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||||| ||| || ||||| | |||||||||||||||||||| | Sbjct 27626 TAGGGACAAATCCTCTCAAATCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 27685 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 27686 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 27745 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 27746 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 27779 >seq25 Length=66545 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 53912 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 53971 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 53972 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 54031 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 54032 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 54091 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 54092 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 54151 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 54152 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 54185 >seq7 Length=30121 Score = 306 bits (338), Expect = 6e-81 Identities = 232/274 (85%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| |||||||||||| |||||||| ||| | Sbjct 13135 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCATACTTAGCTACCCGG 13194 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 13195 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTATGTTCATCCCGGTCCTCTCGTAC 13254 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 13255 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 13314 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 13315 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 13374 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 13375 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 13408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780789743216