Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1353 291 2e-76 seq1352 291 2e-76 seq1349 291 2e-76 seq1334 291 2e-76 seq25 291 2e-76 seq7 291 2e-76 seq762 288 2e-75 seq736 288 2e-75 >seq1353 Length=15711 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 6682 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 6741 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 6742 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 6801 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 6802 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 6861 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 6862 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 6909 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 6910 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 6968 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 6969 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 7018 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 7019 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 7065 >seq1352 Length=32338 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 26605 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 26664 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 26665 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 26724 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 26725 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 26784 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 26785 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 26832 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 26833 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 26891 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 26892 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 26941 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 26942 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 26988 >seq1349 Length=20638 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 4951 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 4892 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 4891 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 4832 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 4831 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 4772 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 4771 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 4724 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 4723 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 4665 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 4664 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 4615 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 4614 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 4568 >seq1334 Length=31116 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 7685 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 7626 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 7625 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 7566 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 7565 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 7506 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 7505 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 7458 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 7457 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 7399 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 7398 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 7349 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 7348 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 7302 >seq25 Length=66545 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 58282 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 58341 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 58342 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 58401 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 58402 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 58461 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 58462 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 58509 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 58510 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 58568 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 58569 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 58618 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 58619 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 58665 >seq7 Length=30121 Score = 291 bits (322), Expect = 2e-76 Identities = 314/415 (76%), Gaps = 32/415 (8%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| || Sbjct 17571 GTGCTTTACAATCCGAAGACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCC 17630 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 17631 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 17690 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| |||||||| |||| |||||| ||| |||| ||||||| Sbjct 17691 GTGTGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 17750 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| | || || ||| | ||| ||| | | || Sbjct 17751 ACCAACTAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTACGC---CT 17798 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTT-CCAGTGGTTATCCCCCTCCATC 299 ||| | | | || ||||||||||||| | |||| ||||| |||||||||| || Sbjct 17799 TTGACCCTCAGGTGTCATGCGGTATTAGCACCAGTTTCCCAGT-GTTATCCCCCACCCAT 17857 Query 300 AGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCT 359 | || | || | | |||||||||||||||||||| | || | || || Sbjct 17858 GGATAGATACCTACGCGTTACTCACCCGTCCGCCACT-------AAGGCCGAAACCT--- 17907 Query 360 TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 17908 --------TCGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 17954 >seq762 Length=13283 Score = 288 bits (318), Expect = 2e-75 Identities = 312/414 (75%), Gaps = 30/414 (7%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| ||||| ||||||||| ||||||||||| |||| |||||| || | || Sbjct 11087 GTGCTTTACAATCCGAAAACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTTCCCC 11146 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 11147 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 11206 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| |||||||||||||||||||| |||| |||||| ||| |||| ||||||| Sbjct 11207 GTGTGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 11266 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||| |||||||| | || || ||| | ||| ||| | | || Sbjct 11267 ACCAACAAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTGCGC---CT 11314 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 ||| | | | | ||||||||||||| | |||||| | |||||||||| || Sbjct 11315 TTGACCCTCAGGTATCATGCGGTATTAGCTCCAGTTTCCCGGAGTTATCCCCCACCCATG 11374 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 | || |||| | | |||||||||||||||||||| ||| |||| ||| Sbjct 11375 GATAGATTCCTACGCGTTACTCACCCGTCCGCCACT--------AAGGCCGAAGC--CTT 11424 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 11425 --------CGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 11470 >seq736 Length=32925 Score = 288 bits (318), Expect = 2e-75 Identities = 312/414 (75%), Gaps = 30/414 (7%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||| ||||| ||||||||| ||||||||||| |||| |||||| || | || Sbjct 31908 GTGCTTTACAATCCGAAAACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTTCCCC 31967 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 31968 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 32027 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| |||||||||||||||||||| |||| |||||| ||| |||| ||||||| Sbjct 32028 GTGTGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCC 32087 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||| |||||||| | || || ||| | ||| ||| | | || Sbjct 32088 ACCAACAAGCTAATCAAACGCAGGCTCCTCC-------ACAGG--CGACTTGCGC---CT 32135 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 ||| | | | | ||||||||||||| | |||||| | |||||||||| || Sbjct 32136 TTGACCCTCAGGTATCATGCGGTATTAGCTCCAGTTTCCCGGAGTTATCCCCCACCCATG 32195 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 | || |||| | | |||||||||||||||||||| ||| |||| ||| Sbjct 32196 GATAGATTCCTACGCGTTACTCACCCGTCCGCCACT--------AAGGCCGAAGC--CTT 32245 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| |||||||||||||||| || |||||||||||||| |||||| Sbjct 32246 --------CGTGCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCGCTCTGAG 32291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222383424256