Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1353 358 2e-96 seq1352 358 2e-96 seq1349 358 2e-96 seq1334 358 2e-96 seq762 358 2e-96 seq736 358 2e-96 seq25 358 2e-96 seq7 358 2e-96 seq1350 127 6e-27 >seq1353 Length=15711 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 6885 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 6826 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 6825 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 6766 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 6765 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 6706 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 6705 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 6646 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 6645 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 6586 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 6585 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 6544 >seq1352 Length=32338 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 26808 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 26749 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 26748 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 26689 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 26688 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 26629 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 26628 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 26569 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 26568 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 26509 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 26508 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 26467 >seq1349 Length=20638 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 4748 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 4807 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 4808 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 4867 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 4868 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 4927 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 4928 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 4987 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 4988 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 5047 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 5048 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 5089 >seq1334 Length=31116 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 7482 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 7541 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 7542 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 7601 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 7602 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 7661 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 7662 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 7721 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 7722 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 7781 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 7782 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 7823 >seq762 Length=13283 Score = 358 bits (396), Expect = 2e-96 Identities = 281/335 (84%), Gaps = 1/335 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| ||||||||| |||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 11290 CCTGCGTTTGATTAGCTTGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 11231 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 |||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 11230 GTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 11171 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| ||| |||||| |||||| |||||||| | || Sbjct 11170 AGCAGTGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAA 11111 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| ||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 11110 GAAGGTTTTCGGATTGTAAAGCACTTTCGGCGGGGACGATGATGACGGTACCCGCAGAAG 11051 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 11050 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 10991 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||| ||| |||||||||||| | ||||| ||||| Sbjct 10990 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTT 10957 >seq736 Length=32925 Score = 358 bits (396), Expect = 2e-96 Identities = 281/335 (84%), Gaps = 1/335 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| ||||||||| |||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 32111 CCTGCGTTTGATTAGCTTGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 32052 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 |||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 32051 GTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 31992 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| ||| |||||| |||||| |||||||| | || Sbjct 31991 AGCAGTGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTGTGAA 31932 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| ||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 31931 GAAGGTTTTCGGATTGTAAAGCACTTTCGGCGGGGACGATGATGACGGTACCCGCAGAAG 31872 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 31871 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 31812 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||| ||| |||||||||||| | ||||| ||||| Sbjct 31811 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTT 31778 >seq25 Length=66545 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 58485 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 58426 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 58425 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 58366 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 58365 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 58306 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 58305 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 58246 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 58245 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 58186 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 58185 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 58144 >seq7 Length=30121 Score = 358 bits (396), Expect = 2e-96 Identities = 286/343 (83%), Gaps = 1/343 (0%) Strand=Plus/Minus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 || |||| |||||||||||||||| ||||| ||| ||||||||||| ||||| |||| | Sbjct 17774 CCTGCGTTTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGATGATCAATAGCTG 17715 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 ||||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||| Sbjct 17714 GTTTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGC 17655 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| |||||||| || |||||| |||||| |||||||| | || Sbjct 17654 AGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGAA 17595 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGG 397 ||||| |||||| | ||||||| || || | ||| ||| |||||||||| | || | Sbjct 17594 GAAGGTCTTCGGATTGTAAAGCACTTTCGACGGGGACGATGATGACGGTACCCGTAGAAG 17535 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 17534 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 17475 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| ||| |||||||||||| | ||||| ||||| | |||| Sbjct 17474 GAATGACT-GGGCGTAAAGGGCGTGTAGGCGGTTTGTACAGTC 17433 >seq1350 Length=24878 Score = 127 bits (140), Expect = 6e-27 Identities = 120/148 (81%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 353 GTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACT 412 ||||||| || || | ||| ||| |||||||||| | || |||||||||||||||| Sbjct 9 GTAAAGCACTTTCGACG-GGACGATGATGACGGTACCCGTAGAAGAAGCCCCGGCTAACT 67 Query 413 ACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGT 472 |||||||||||||||||||||||| | |||||||||||| |||||| ||| |||||| Sbjct 68 TCGTGCCAGCAGCCGCGGTAATACG-AAGGGGCTAGCGTTGCTCGGAATGACT-GGGCGT 125 Query 473 AAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| || | ||||| ||||| | |||| Sbjct 126 AAA-GGCGTGTAGGCGGTTTGTACAGTC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497579692544