Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1353 187 5e-45 seq1352 187 5e-45 seq1349 187 5e-45 seq1334 187 5e-45 seq7 187 5e-45 seq25 179 7e-43 seq762 163 5e-38 seq736 154 3e-35 seq1350 127 4e-27 >seq1353 Length=15711 Score = 187 bits (206), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 4854 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 4795 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 ||| || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 4794 GAGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 4736 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 4735 GT-ATCGTGATCTGAATACATAGGGTTACGAGGCGAACCCGGGGAACTGAAACATCTCAG 4677 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 4676 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 4626 >seq1352 Length=32338 Score = 187 bits (206), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 24776 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 24717 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 ||| || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 24716 GAGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 24658 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 24657 GT-ATCGTGATCTGAATACATAGGGTTACGAGGCGAACCCGGGGAACTGAAACATCTCAG 24599 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 24598 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 24548 >seq1349 Length=20638 Score = 187 bits (206), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 6780 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 6839 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 ||| || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 6840 GAGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 6898 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 6899 GT-ATCGTGATCTGAATACATAGGGTTACGAGGCGAACCCGGGGAACTGAAACATCTCAG 6957 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 6958 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 7008 >seq1334 Length=31116 Score = 187 bits (206), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 9513 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 9572 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 ||| || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 9573 GAGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 9631 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 9632 GT-ATCGTGATCTGAATACATAGGGTTACGAGGCGAACCCGGGGAACTGAAACATCTCAG 9690 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 9691 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 9741 >seq7 Length=30121 Score = 187 bits (206), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 15742 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 15683 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 ||| || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 15682 GAGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 15624 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 15623 GT-ATCGTGATCTGAATACATAGGGTTACGAGGCGAACCCGGGGAACTGAAACATCTCAG 15565 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 15564 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 15514 >seq25 Length=66545 Score = 179 bits (198), Expect = 7e-43 Identities = 182/231 (79%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 56512 GGTGGATGCCTTGGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 56453 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 || || | || | ||||||||||||||||||||||||| ||||| || | ||| Sbjct 56452 -AGCC-GCGAGCAGGCATTGATCCGCAGATTTCCGAATGGGGCAACCCACCCAGCGATGG 56395 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || | |||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 56394 GT-ATCGTGATCTGAATACATAGGT-TACGAGGCGAACCCGGGGAACTGAAACATCTCAG 56337 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| ||||||| |||||||||||||||| Sbjct 56336 TACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAA 56286 >seq762 Length=13283 Score = 163 bits (180), Expect = 5e-38 Identities = 225/310 (73%), Gaps = 5/310 (2%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||||||||||||| | | ||||| |||| |||| Sbjct 9261 GGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTGGCACGCTGCGAAAAGCCACGGG 9202 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| || | | |||||||||| ||| ||||||||||| ||||| | | | Sbjct 9201 GAGCC-GCGAGTAGGCTTTGATCCGTGGATATCCGAATGGGGCAACCCCCTCGCAAGAGG 9143 Query 130 CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTA 189 || | |||||||||||||| || | || ||| ||| |||||||||||||| |||| Sbjct 9142 -ATCCCTCACTGAATACATAGGTGTGGGAGGCAAACCCGGGGAACTGAAACATCTCAGTA 9084 Query 190 GCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGC 249 ||| ||||||||| ||||| |||||||| |||||||||||||||| ||| || Sbjct 9083 CCTGGAGGAAAAGACATCAATTGAGATTCCGCTAGTAGTGGCGAGCGAACGCGGAACAGG 9024 Query 250 CTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGA 309 | | | | ||| | || |||| ||||||||| | |||||||| |||||| Sbjct 9023 C--CAGTGGCCATGAGAAGACA-AGCAGAATGCTCTGGAAAGTGCAGCCATAGTGGGTGA 8967 Query 310 TAGCCCCGTA 319 ||||||| || Sbjct 8966 TAGCCCCTTA 8957 >seq736 Length=32925 Score = 154 bits (170), Expect = 3e-35 Identities = 223/308 (72%), Gaps = 15/308 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | |||||||||||||||| | | ||||| |||| |||| Sbjct 30090 GGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTGGCACGCTGCGAAAAGCCACGGG 30031 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGG- 128 ||| || | | |||||||||| ||| ||||||||||| ||||| | ||| Sbjct 30030 GAGCC-GCGAGTAGGCTTTGATCCGTGGATATCCGAATGGGGCAACCCCCTCGCAAGGGA 29972 Query 129 TCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGT 188 || | || |||||||||||||| | || ||| ||| |||||||||||||| ||| Sbjct 29971 TCCT--CA--CTGAATACATAGGTGG---AGGCAAACCCGGGGAACTGAAACATCTCAGT 29919 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 | ||| ||||||||| ||||| |||||||| |||||||||||||||| ||| || Sbjct 29918 ACCTGGAGGAAAAGACATCAATTGAGATTCCGCTAGTAGTGGCGAGCGAACGCGGAACAG 29859 Query 249 CCTTTACGAGATAGTTGAATTGA-TAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGT 307 | || ||| || || |||| ||||||||| | |||||||| |||| Sbjct 29858 -----GCCAGTGGCCTGAGAAGACAAGCAGAATGCTCTGGAAAGTGCAGCCATAGTGGGT 29804 Query 308 GATAGCCC 315 |||||||| Sbjct 29803 GATAGCCC 29796 >seq1350 Length=24878 Score = 127 bits (140), Expect = 4e-27 Identities = 176/231 (76%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||| ||| | |||||| ||||||||||| | |||||||||||| ||| Sbjct 1760 GGTGGATGCCT-GGCACTAGGAGGCGACGAAGGACGTAGCACGCTGCGATAAGCTGTGGG 1818 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGG 127 || || | || | |||||||||||||| |||||||||| ||||| || | ||| Sbjct 1819 -AGCC-GCGAGCAG-CATTGATCCGCAGATT-CCGAATGGGGCAACCCACCCAGCGATGG 1874 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 || || ||||||||||||| | | | |||||| ||| |||||||||||||| || Sbjct 1875 TATCGTG-AT-CTGAATACATAGGGTTACGAGGCGAACCCGG-GAACTGAAACATCTCAG 1931 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||| ||||||||| ||||| |||| || |||||| ||||||||| Sbjct 1932 TACCTGGAGGAAAAGACATCAA-TGAGA-TCTGCTAGTAGT-GCGAGCGAA 1979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918387546496