Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq762 161 2e-37 seq736 161 2e-37 seq1353 158 3e-36 seq1352 158 3e-36 seq1349 158 3e-36 seq1334 158 3e-36 seq25 158 3e-36 seq7 158 3e-36 >seq762 Length=13283 Score = 161 bits (178), Expect = 2e-37 Identities = 156/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| | ||||||| || ||||| | | ||||| |||| | || |||| Sbjct 11091 TTTACAATCCGAA-AACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTTCCCCCAT 11149 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 11150 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 11209 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||||| | |||| ||| | | || ||| |||| ||||||| || Sbjct 11210 TGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 11269 Query 269 TACTACCTAATGGAACGCA 287 || | ||||| |||||| Sbjct 11270 AACAAGCTAATCAAACGCA 11288 >seq736 Length=32925 Score = 161 bits (178), Expect = 2e-37 Identities = 156/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| | ||||||| || ||||| | | ||||| |||| | || |||| Sbjct 31912 TTTACAATCCGAA-AACCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTTCCCCCAT 31970 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 31971 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 32030 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||||| | |||| ||| | | || ||| |||| ||||||| || Sbjct 32031 TGGCTGATCATCCTCTCAGACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 32090 Query 269 TACTACCTAATGGAACGCA 287 || | ||||| |||||| Sbjct 32091 AACAAGCTAATCAAACGCA 32109 >seq1353 Length=15711 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 6686 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 6744 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 6745 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 6804 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 6805 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 6864 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 6865 AACTAGCTAATCAAACGCA 6883 >seq1352 Length=32338 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 26609 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 26667 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 26668 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 26727 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 26728 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 26787 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 26788 AACTAGCTAATCAAACGCA 26806 >seq1349 Length=20638 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 4947 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 4889 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 4888 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 4829 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 4828 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 4769 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 4768 AACTAGCTAATCAAACGCA 4750 >seq1334 Length=31116 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 7681 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 7623 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 7622 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 7563 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 7562 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 7503 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 7502 AACTAGCTAATCAAACGCA 7484 >seq25 Length=66545 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 58286 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 58344 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 58345 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 58404 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 58405 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 58464 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 58465 AACTAGCTAATCAAACGCA 58483 >seq7 Length=30121 Score = 158 bits (174), Expect = 3e-36 Identities = 155/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | | ||||| |||| | | |||| Sbjct 17575 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATTGCTGGATCAGGGTTGCCCCCAT 17633 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 17634 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 17693 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| || | |||||||| | | |||| ||| | | || ||| |||| ||||||| || Sbjct 17694 TGGCTGATCATCCTCTCAAACCAGCTATTGATCATCGCCTTGGTAGGCCTTTACCCCACC 17753 Query 269 TACTACCTAATGGAACGCA 287 |||| ||||| |||||| Sbjct 17754 AACTAGCTAATCAAACGCA 17772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068785507072