Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq977 93.3 2e-13 >seq977 Length=388812 Score = 93.3 bits (102), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 10/271 (4%) Strand=Plus/Plus Query 21632 AACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTG 21691 ||| || ||||| || |||| ||||| ||||||| || || | |||| | | | Sbjct 370693 AACGCCGGTGGATCCGAATCCGCCCTCCCCGCGCTCAGTGTCCTCCAGCTTGTCGACCAG 370752 Query 21692 CGCCTGCTGCAAAACTGGGGTCGA-GATGCGTTCCAGGATGAGTTGGGCGATGCGATCGC 21750 | || ||| | || | || ||||||||| ||||| |||||||| || || | Sbjct 370753 CTCCAGCTCC-------GGATAGAAGATGCGTTCGCAGATGAACTGGGCGATTCGGTCAC 370805 Query 21751 CATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCC 21810 | |||| | || || ||| || ||||||||||| |||||||| || | ||||| | Sbjct 370806 CGCGCTTCACCTCGAACTCCACTTCCGAGTGGTTGAACAGCACCACACCCAGGTTGCCGC 370865 Query 21811 TATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCC 21869 | || || ||| || || || || || ||||||| |||||||| ||| ||||| Sbjct 370866 GGT-AGTCCTCGTCCACCACGCCAGCTCCCACGTCGATAAAGTTCTTCACGGCGAGACCG 370924 Query 21870 GATCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 || | || || || || |||||| ||||| Sbjct 370925 GAGCGTGGGGCCACCCGACCGTAGGAGCCCT 370955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084702096854088