Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3543 73.4 6e-11 >seq3543 Length=6891 Score = 73.4 bits (80), Expect = 6e-11 Identities = 82/105 (78%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 122 CCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGCGG 180 |||||||| || | | || ||| || ||||| ||| | || || |||||| || | | Sbjct 518 CCGGACCTCTCAGTCTAGAAAATATAC--GTTGA-TACTTTCATTGAAGCGCGTGTTCAG 574 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||| |||||||||||||| |||| |||||||||| ||||| || Sbjct 575 CCCAGGACATCTAAGGGCATTACAGGCCTGTTATTG-CTCAATCT 618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751944495585