Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq5743 250 6e-64 >seq5743 Length=1090 Score = 250 bits (276), Expect = 6e-64 Identities = 309/412 (75%), Gaps = 13/412 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||| || ||| |||||||||||| |||||| |||| | | || ||| | | Sbjct 271 CGACTACGGCTCTCGCCCTCGCCTTAGGGGCCGACTAACCCTGCGTGGATTAACCTTGCG 330 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | ||| | | | || ||||||||||| | Sbjct 331 CAGGAACCCTTGGACTTTCGGCGACAGTGTTTCTCGCACTGTTTGTCGCTACTCATGTCA 390 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGG-CAGCTTCACC-ACTGACAC 177 |||||| |||| | | ||||| | | ||||||| | | |||||| || || Sbjct 391 GCATTCGCACTTCCGATATCTCCAG-AGAGGGTCACCCCGTCTCCTTCACAGACCTACGG 449 Query 178 GACGCTCCCCTACCCAACCA--CACAGGT-TGC---CACAGCTTCGGCGGATAACTTAAG 231 ||||||| ||||| | || || | ||| |||||||||||| | ||| || Sbjct 450 AACGCTCCGCTACCGCGCATATCAAAGATATGCACCCACAGCTTCGGCACGTGGCTTGAG 509 Query 232 CCCCGCTACATTATCGGCGC--GGAATCACTT-GACCAGTGAGCTATTACGCACTCTTTC 288 ||||| |||||| ||||||| || || || ||||||||||||||||||| ||||| Sbjct 510 CCCCGTTACATTTTCGGCGCAGGGTTTCTATTAGACCAGTGAGCTATTACGCTTTCTTTA 569 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 ||||||||||||||| ||||||||||||||||||| | | | | ||||||||||||||| Sbjct 570 AAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAATCCCCACATCCTTTCCCA 629 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || ||| | |||||||||||||||| || |||||||||||||||||||| Sbjct 630 CTTAGCCACGATTTAGGGGCCTTAGCTGGTGGTCTGGGCTGTTTCCCTCTCG 681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177510278656