Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5743 358 2e-96 >seq5743 Length=1090 Score = 358 bits (396), Expect = 2e-96 Identities = 369/478 (77%), Gaps = 5/478 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| ||||| | |||||||||||| ||||||||| |||| Sbjct 1017 CGAGTCTGAATAGGGCGTCTAGTTGCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCAT 958 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||||||||||||| ||||||| |||||| ||| |||||||||| Sbjct 957 GGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACTCACGCCTGTTGAAAAAG 898 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | || |||||||||||| |||||||||||||| || |||||| ||||||||||||||||| Sbjct 897 TCGGAGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCTC 838 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| ||||| |||||| | ||| ||| | ||| ||||||||||||||| | Sbjct 837 CGCGAAATCTATTGAGGTAGACCGTCAGGTATTTACCCCGGGGGGTAGAGCACTGGATGG 778 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| | | ||||||||||| |||||||||||| | | ||| ||| Sbjct 777 GCTAGGGGGGCCCAAAGCCTTACCAAACCTAACCAAACTCCGAATACCCGGAAGTATTAG 718 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 | || || || ||||||||||||||| | ||||||| || | || ||| | Sbjct 717 CCTGGCAGACAGACAGTGGGTGCTAAGGTCCATTGTCGAGAGGGAAACAGCCCAGACCAC 658 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||||||| |||| ||||||| | || || || | | | || ||| | Sbjct 657 CAGCTAAGGCCCCTAAATCGTGGCTAAGTGGGA--AAGGATGTGGGGATTCCAAAACAAC 600 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||| |||||||| |||||||||| || |||||||| |||||| |||||||| ||| Sbjct 599 CAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689471269376