Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20simulans_20[refseq_20GCF_5F000754195.2_202014-09-19] 7,619 sequences; 124,963,774 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6424 381 2e-103 seq1025 75.2 3e-11 >seq6424 Length=2770 Score = 381 bits (422), Expect = 2e-103 Identities = 405/520 (78%), Gaps = 22/520 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | || |||| Sbjct 2633 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTAACTA 2574 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 2573 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 2514 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 2513 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 2454 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| |||||| |||||||||| ||||||| || | ||| || Sbjct 2453 GTAGTCCTAGATACTACCATCAAAAGTTTATAGGGCAGACATTTGAAAGATCTGTCGTCG 2394 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| || || | ||||| || | || || || || | | Sbjct 2393 GTACAAGACCATATGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 2335 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||| |||| |||||||| ||| | || ||| || | ||| | ||| Sbjct 2334 TCGC-TTGG-TTTTAGCCTAATAAAAGCACGTGTCCCATAAGGTTCATGTTTTAATTGCA 2277 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 2276 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 2219 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| | || |||||||| | || | | | |||||||||||| Sbjct 2218 ATAACTGATATAATGAGCCCTCTGCGGTTTCACT-TTTAATTCGTGTGTACTTAGACATG 2160 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||||||| Sbjct 2159 CATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 2120 >seq1025 Length=751 Score = 75.2 bits (82), Expect = 3e-11 Identities = 43/44 (98%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 751 CATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510284922624