Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq4772 159 5e-37
seq8168 147 3e-33
seq5061 147 3e-33
seq4896 147 3e-33
>seq4772
Length=290822
Score = 159 bits (176), Expect = 5e-37
Identities = 178/228 (78%), Gaps = 11/228 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||| |||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 225518 GTACAAAGGCCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 225461
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCA-AAGA 117
| ||| | | |||| || || | | ||||| | | || || | |||| ||||
Sbjct 225460 CGAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGTA--ATAAAGTGGTTCAGAAGA 225404
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
|||||||||||| |||| | ||| | | || |||||| | ||| |||||||||||||
Sbjct 225403 TTACCCGGACCTCTCGGTCTAGG--AAAAACACGTTGATAATTTCATTGTAGCGCGCGTG 225346
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
| |||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 225345 CAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 225299
>seq8168
Length=950709
Score = 147 bits (162), Expect = 3e-33
Identities = 179/231 (77%), Gaps = 15/231 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 560763 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 560706
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
| ||| | | |||| || || | | ||||| | || || || | |||| | |
Sbjct 560705 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 560649
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176
| |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||||
Sbjct 560648 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 560592
Query 177 GCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|| |||||| |||||| |||||||||||||||||||||||| ||||| ||
Sbjct 560591 GCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTG-CTCAATCT 560542
>seq5061
Length=120080
Score = 147 bits (162), Expect = 3e-33
Identities = 174/224 (78%), Gaps = 14/224 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 65795 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 65852
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
| ||| | | |||| || || | | ||||| | || || || | |||| | |
Sbjct 65853 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 65909
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176
| |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||||
Sbjct 65910 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 65966
Query 177 GCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCC 218
|| |||||| |||||| ||||||||||||||||||||||||||
Sbjct 65967 GCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTGCC 66010
>seq4896
Length=24350
Score = 147 bits (162), Expect = 3e-33
Identities = 174/224 (78%), Gaps = 14/224 (6%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| |
Sbjct 5298 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 5355
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118
| ||| | | |||| || || | | ||||| | || || || | |||| | |
Sbjct 5356 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 5412
Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176
| |||||||||| |||| | ||| ||| || ||||| ||| | || ||||||||||||
Sbjct 5413 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 5469
Query 177 GCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCC 218
|| |||||| |||||| ||||||||||||||||||||||||||
Sbjct 5470 GCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTGCC 5513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751936766200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |