Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5061 127 4e-27 seq4896 127 4e-27 seq8168 123 5e-26 >seq5061 Length=120080 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 66795 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 66736 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 66735 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 66677 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 66676 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 66617 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 66616 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 66558 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 66557 AAAGTTAGAGG 66547 >seq4896 Length=24350 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 6298 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 6239 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 6238 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 6180 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 6179 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 6120 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 6119 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 6061 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 6060 AAAGTTAGAGG 6050 >seq8168 Length=950709 Score = 123 bits (136), Expect = 5e-26 Identities = 183/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 559757 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 559816 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 559817 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 559875 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 559876 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 559935 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 ||| |||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 559936 GTCGTAAGCCTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 559994 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 559995 AAAGTTAGAGG 560005 Score = 123 bits (136), Expect = 5e-26 Identities = 183/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 562855 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 562914 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 562915 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 562973 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | || ||| | |||||||||||||||||| Sbjct 562974 ATTAATAGAAGCAGTTTGGGGGCATTAGCATTACGACGCGAGAGGTGAAATTCTTGGACC 563033 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 563034 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 563092 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 563093 AAAGTTAGAGG 563103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915120560640