Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8168 167 4e-39 seq5061 163 5e-38 seq4896 163 5e-38 seq4772 91.5 2e-16 >seq8168 Length=950709 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 560357 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 560298 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 560297 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 560258 Score = 98.7 bits (108), Expect = 2e-18 Identities = 89/108 (82%), Gaps = 7/108 (6%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||| | Sbjct 560607 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTG-C 560549 Query 74 TCAAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 |||| || ||| | ||| || || | | |||| | ||||||||||| Sbjct 560548 TCAATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCCAG 560503 >seq5061 Length=120080 Score = 163 bits (180), Expect = 5e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 66201 GTCTCGTTCATTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 66260 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 66261 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 66300 Score = 93.3 bits (102), Expect = 7e-17 Identities = 88/108 (81%), Gaps = 7/108 (6%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||| Sbjct 65951 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTGCC 66010 Query 74 TCAAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||| || ||| | ||| || || | | |||| | |||||||| || Sbjct 66011 -CAATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 66055 >seq4896 Length=24350 Score = 163 bits (180), Expect = 5e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 5704 GTCTCGTTCATTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 5763 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 5764 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 5803 Score = 93.3 bits (102), Expect = 7e-17 Identities = 88/108 (81%), Gaps = 7/108 (6%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCT--AAGGGCATCACAGACCTGTTATTGCC 73 ||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||| Sbjct 5454 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAAAGGGCATCACAGACCTGTTATTGCC 5513 Query 74 TCAAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 ||| || ||| | ||| || || | | |||| | |||||||| || Sbjct 5514 -CAATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 5558 >seq4772 Length=290822 Score = 91.5 bits (100), Expect = 2e-16 Identities = 60/65 (92%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 225362 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 225304 Query 76 AAACT 80 || || Sbjct 225303 AATCT 225299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796732999080