Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5252 441 2e-121 seq5940 295 2e-77 seq8168 215 2e-53 seq4521 190 7e-46 seq5061 158 4e-36 >seq5252 Length=4647 Score = 441 bits (488), Expect = 2e-121 Identities = 322/375 (86%), Gaps = 13/375 (3%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 688 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGACGATAC 747 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 748 CAAACCGAGGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 807 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 808 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 867 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 868 TGGCTGTGGTTTCGCTAGATAGAAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATA 927 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 928 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTAATAGTTACTCCCG 987 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 988 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 1047 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 1048 CACATTGTGTCAACA 1062 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 383 CTTTTGCTCTAGGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 442 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 443 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 489 >seq5940 Length=2487 Score = 295 bits (326), Expect = 2e-77 Identities = 171/176 (97%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 398 TAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 457 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 458 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACT 517 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 518 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 573 >seq8168 Length=950709 Score = 215 bits (238), Expect = 2e-53 Identities = 125/129 (97%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553650 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTG 553591 Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553590 ACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 553531 Query 525 GCGTCAACA 533 | ||||||| Sbjct 553530 GTGTCAACA 553522 Score = 147 bits (162), Expect = 7e-33 Identities = 93/101 (92%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||||||||||| | ||| |||| ||||||||||| |||| Sbjct 548669 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTGAACCGAGCTTACTTGAATTTCTTTACTT 548728 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||| |||||||||||||||| ||||||| Sbjct 548729 TGACATTCAGAGCACTCGGCAGAAATCACATTGTGTCAACA 548769 Score = 93.3 bits (102), Expect = 1e-16 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 485653 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 485703 >seq4521 Length=714268 Score = 190 bits (210), Expect = 7e-46 Identities = 158/194 (81%), Gaps = 13/194 (7%) Strand=Plus/Plus Query 197 aaaCGATAAGGGTAGTGGTATTTCACTTGCGC--CGAAACGG-----------CTCCCAC 243 |||| ||||| |||||||||||||| ||||| | |||| | ||||||| Sbjct 708682 AAACAATAAGAGTAGTGGTATTTCATTTGCGATACCAAACCGAAGTCTAATATCTCCCAC 708741 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||||||| | ||| | ||| | | || ||||||||||||||| |||||| Sbjct 708742 TTATTCTACACCTCTTATGTCTCCTTACACTGCCAGATTAGAGTCAAGCTCAAAAGGGTC 708801 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 708802 TTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 708861 Query 364 ATAGGGACAGTGGG 377 |||||||||| ||| Sbjct 708862 ATAGGGACAGGGGG 708875 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 708352 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 708411 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 708412 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 708458 >seq5061 Length=120080 Score = 158 bits (174), Expect = 4e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| Sbjct 60943 CTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCCTTCTTGAATTTCTTCACTTT 61002 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||| ||||||| Sbjct 61003 GACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 61042 Score = 147 bits (162), Expect = 7e-33 Identities = 93/101 (92%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||||||||||| | ||| |||| ||||||||||| |||| Sbjct 103439 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTGAACCGAGCTTACTTGAATTTCTTTACTT 103498 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||| |||||||||||||||| ||||||| Sbjct 103499 TGACATTCAGAGCACTCGGCAGAAATCACATTGTGTCAACA 103539 Score = 118 bits (130), Expect = 3e-24 Identities = 133/179 (74%), Gaps = 13/179 (7%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--CGAAACGG--------- 236 |||||| |||| ||||| |||||||||||||| | ||| | |||| | Sbjct 95819 TAAGTATGGAAACAATAAGAGTAGTGGTATTTCATTGGCGATACCAAACCGAAGTCTAAA 95878 Query 237 --CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||| || ||||||||||| | ||| | ||| | | || ||||||||||||| Sbjct 95879 ATCTCCCACCTAGTCTACACCTCTTATGTCTCCTTACACTGCCAGATTAGAGTCAAGCTC 95938 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 || |||| |||| || |||||| ||| | ||||||||| |||||||||||||||||| Sbjct 95939 AAAAGGGCCTTCATTACCCGCTAATTATTCTAAGCCCGTTTCCTTGGCTGTGGTTTCGC 95997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635058064640