Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4896 399 7e-109 seq8168 394 3e-107 seq5061 311 3e-82 >seq4896 Length=24350 Score = 399 bits (442), Expect = 7e-109 Identities = 409/520 (79%), Gaps = 22/520 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 6597 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 6656 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 6657 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 6716 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 6717 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATA 6776 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 6777 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 6836 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| ||| || | ||||| || | || || || || | | Sbjct 6837 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 6895 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||||||| | |||||||| ||| | || ||| || | ||| | ||| Sbjct 6896 TCGC-TTGGTTTTAGA-CTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCA 6953 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 6954 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 7011 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| || || |||||||| | || | | | |||||||||||| Sbjct 7012 ATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGTGTGTACTTAGACATG 7070 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||||||| Sbjct 7071 CATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 7110 >seq8168 Length=950709 Score = 394 bits (436), Expect = 3e-107 Identities = 408/520 (78%), Gaps = 22/520 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 559458 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 559399 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 559398 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 559339 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 559338 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATA 559279 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 559278 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 559219 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| ||| || | ||||| || | || || || || | | Sbjct 559218 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 559160 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||| |||| |||||||| ||| | || ||| || | ||| | ||| Sbjct 559159 TCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCA 559102 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 559101 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 559044 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| || || |||||||| | || | | | |||||||||||| Sbjct 559043 ATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGTGTGTACTTAGACATG 558985 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||||||| Sbjct 558984 CATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 558945 Score = 394 bits (436), Expect = 3e-107 Identities = 408/520 (78%), Gaps = 22/520 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | ||||||| Sbjct 562556 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTA 562497 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| |||||||||| |||||||| |||||||||||| Sbjct 562496 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTTCCTTCCTTAGATGTGGTAGCC 562437 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 562436 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 562377 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || ||||||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 562376 GTAGTCCTAGATCCTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 562317 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| ||| || | ||||| || | || || || || | | Sbjct 562316 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 562258 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||| |||| ||||| || ||| | || ||| || | ||| | ||| Sbjct 562257 TCGC-TTGG-TTTTAGCCTAATTAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCA 562200 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 562199 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 562142 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||| ||||||||| || || |||||||| | || | | | |||||||||||| Sbjct 562141 ATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGTGTGTACTTAGACATG 562083 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| ||||||||||| Sbjct 562082 CATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 562043 >seq5061 Length=120080 Score = 311 bits (344), Expect = 3e-82 Identities = 349/454 (77%), Gaps = 21/454 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | | ||| ||||||| ||||| | |||||| Sbjct 67094 GTACTCATTCCAATTACAGGGCCTCGGATATGAGTCCTGTATTGTTATTTTTCGTCACTT 67153 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 67154 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 67213 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 || ||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| Sbjct 67214 GTCTCTCAGGCTCCTTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 67273 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 67274 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 67333 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGCCCCGAA 290 | |||| |||| ||| || | ||||| || | || || || || | | Sbjct 67334 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGA 67392 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT-TTAGCA 346 || |||| |||| |||||||| ||| | || ||| || | ||| | ||| Sbjct 67393 TCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCA 67450 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACG 404 ||||||||||||||||||||||| |||||||| ||| | || || ||| || ||| Sbjct 67451 TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACC 67508 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 ||||||||| ||||||||| || || |||||||| Sbjct 67509 ATAACTGATATAATGAGCCTTTTGCGGTTTCACT 67542 Score = 86.0 bits (94), Expect = 2e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 |||||||||||||||||||||||||| |||||||| ||| | || ||| || ||| Sbjct 57135 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAATTGTTAACGATCTAAGGAAC 57194 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTC 435 ||||||||| |||||| || || || ||||| Sbjct 57195 AATAACTGATATAATGATCCTTTTGCGGTTTC 57226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510268897280