Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4563 446 1e-120 seq1 444 5e-120 >seq4563 Length=14502029 Score = 446 bits (494), Expect = 1e-120 Identities = 602/838 (72%), Gaps = 3/838 (0%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || || || |||||||| ||||||||||| ||| ||||||| ||| ||| |||| Sbjct 3739061 AGGCTGAGGCCTCTTTCTGGACCGTGGAGGAGGTGGATCTGTCCAAGGACCTGACCGACT 3739120 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | || | | || |||| || ||||| || ||| |||| |||||||||| Sbjct 3739121 GGCACCGCCTGAAGGACGACGAACGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCG 3739180 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || || ||||| || ||||| | |||| || ||| ||||||||||| | Sbjct 3739181 CATCCGATGGCATCGTGAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 3739240 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 ||||||| || || ||||| |||||||| || ||||||||||| || |||||||| |||| Sbjct 3739241 CGGAGGCTCGGTGCTTCTATGGCTTCCAAATCGCCATGGAGAACGTGCACTCGGAAATGT 3739300 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 ||||||| || ||||| || |||||| |||| | | | || || ||||||| | Sbjct 3739301 ACAGTGTGCTGATCGACACTTACATCCGGGATCCGCATCAGCGGGACTACCTGTTCAACG 3739360 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 |||||||||| || ||||| |||||||| || ||||| |||||| | |||||| || Sbjct 3739361 CCATCGAGACAATGCCGGCTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCTCCT 3739420 Query 61466 GTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 | | |||| | || || || || | | || || || | |||||||| | || | Sbjct 3739421 CCAAATCGGCCAATTTCGGGGAGCGCATCATTGCCTTCGCTGCCGTCGAGGGCATCTTCT 3739480 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 |||| || |||||| | || || ||| ||||||| || || || ||||| || |||| Sbjct 3739481 TCAGCGGCAGCTTTGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGACTGA 3739540 Query 61586 CCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGC 61645 ||||| ||| ||| | || || |||||||||||| ||||||| || ||||| || || Sbjct 3739541 CCTTCTCCAACGAGCTTATCTCCCGCGACGAGGGCTTGCATTGCGACTTTGCCGTGCTGA 3739600 Query 61646 TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTG 61705 | ||| | | || ||||| | || || | ||||| | ||||| | || | Sbjct 3739601 TGTTCCAGCACT---TGGTGCAGCGACCCAGGCGCGAGCGCATCATCGAGATCATCCGCG 3739657 Query 61706 AGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCA 61765 | ||||| | || || ||||| || | || || || |||||||| |||||||||| Sbjct 3739658 ATGCGGTGGCCATTGAGCAGGAGTTCTTAACCGATGCCTTGCCCGTAAACCTCATCGGCA 3739717 Query 61766 TGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATT 61825 |||| || | || ||||||||||| |||||||| || || ||||| ||| |||| || | Sbjct 3739718 TGAACTGCGATCTTATGTCGCAGTACATTGAATTCGTGGCGGACCGACTGCTGGTGGAGT 3739777 Query 61826 TGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGC 61885 || | | ||||| ||||| || ||||| ||| | |||||||| ||||| |||| Sbjct 3739778 TGAGCGTTGGCAAAATCTACAATACCAAGAACCCCTTTAACTTCATGGAGATGATCTCGC 3739837 Query 61886 TGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGTGT 61943 |||| || |||||||| || || ||||| || ||||| || || || |||| || Sbjct 3739838 TGGACGGAAAGACGAACTTCTTTGAGAAGAAGGTGGGCGAGTACCAGCGCATGGGAGT 3739895 >seq1 Length=22559587 Score = 444 bits (492), Expect = 5e-120 Identities = 1221/1854 (66%), Gaps = 35/1854 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| || || || ||||| | ||| || | || || ||||| || || Sbjct 20041588 TCTACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACATTCCAGTT 20041647 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || || ||||| ||| | ||| || || || || | | |||| | || || ||||| Sbjct 20041648 TTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTTTGGCTCT 20041707 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 |||||||| || || ||||||||||||||||| || |||| ||| |||||||| ||||| Sbjct 20041708 GCCACATGAATGTTGAACGACTGACTCTGATCTATA-AACGCACCTCGATCTGCGGCCAT 20041766 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | ||| | | || || ||||| || || |||||||| || |||| Sbjct 20041767 CTTAATAGTG-GACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAACCTTCT 20041825 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 || || ||||||| | |||| ||| || | | | ||| || | || ||| Sbjct 20041826 GGGGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCATAT 20041885 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || |||||| ||| || | || | | ||| ||| | || | ||||||| Sbjct 20041886 CGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGGA 20041945 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || ||||| || || | | ||| || || | ||| || || || ||||| Sbjct 20041946 ATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGAATGATTCGT 20042005 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || | |||||| |||||||| ||||| ||||| ||||| ||||||| ||||| | Sbjct 20042006 TGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGGAGTTCC 20042065 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | | |||| | | | ||| | || || | ||||| ||| | |||| ||| Sbjct 20042066 GGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAA--GGTT---CGT 20042120 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | | || | |||||| || | ||||| |||| | || | || || Sbjct 20042121 TGGC-TCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCAT 20042179 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 | | || || || || || ||| |||| ||| |||| || | ||| | | | Sbjct 20042180 AGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGTAGT 20042239 Query 65736 AAATGGTCTCGAAAATGCGTCGATT-AAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 | || || |||||||| | |||| ||| || || ||||| || || || || | Sbjct 20042240 AGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGGGAAC 20042298 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | ||| || | || | ||| || | || || || || || || | ||||||||| | | Sbjct 20042299 CGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTC 20042358 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 |||||||| | ||||| || | |||||| | || |||||||| || || | | Sbjct 20042359 AAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTAAGA 20042418 Query 65915 TTGCGTGTCACCA-CATGCACGATACGTCGCAATTGTTC--GAAATCAAAATGTTTAGGA 65971 || || ||| | || | || || | ||| |||||| | ||| | Sbjct 20042419 TTCTTGGTAACCGTCTTG---GTAACTTCCTTAAGTTTCTTGAAATCGTA-TGTCTTC-- 20042472 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 ||||||||| |||||| || ||||| | ||||| | |||||| || Sbjct 20042473 ---TCGGGAGTG---------ACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACT 20042520 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || ||||| || ||||||| |||||| || ||||| ||||||| ||| || || ||| Sbjct 20042521 GCAATCTCATCCGGAGCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATG 20042580 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||| | |||||| || || ||||| | ||||| |||||||| ||| |||||| || Sbjct 20042581 GTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGG 20042640 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA 66211 | || || || || || | ||||| ||||| ||| || | | ||||| || || Sbjct 20042641 TTTCCAGTTTCGACCTGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAACAGTT 20042700 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 | || | ||| | | || || | || || | | |||||| || ||||| Sbjct 20042701 CTGTTGGCACGACCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCAC 20042760 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || ||| || | || || || ||||| ||||| ||||||||||| |||| || Sbjct 20042761 ACATCGTGAAGCCCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCG 20042820 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || |||||| ||||| |||||||| |||||||| || |||||||| || || | Sbjct 20042821 ACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTT 20042880 Query 66392 TCCTCAATGCCGTGATTTTTGCGCAAG-TCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 ||||| ||||| | |||| | ||| || ||||||||||||| || | ||||| || Sbjct 20042881 TCCTCCTTGCCG-GTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGG 20042939 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 |||||||| ||||| || | || ||| ||||| || ||||| || || || || || Sbjct 20042940 CTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGC 20042999 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 |||||||||||||| | |||||| || || | || || ||| ||||||| || ||| Sbjct 20043000 CACATTGTTGAAGACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCA 20043059 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 || | || || |||||| || || || || || ||||| || ||||||| || Sbjct 20043060 AATCGAGGTGCCCTTTGCCCGGATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTT 20043119 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 |||||| ||||| | |||| | | || ||||| || || ||||| || | || Sbjct 20043120 CGAGATCAAGGCACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCAT 20043179 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 ||||| |||| |||| || || || || |||||| || | || || || || Sbjct 20043180 GGTCAAGAGGAAGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGG 20043239 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | || ||||| ||||| | |||| | ||| || || || | | | ||||| || Sbjct 20043240 CGACGCATGCGTGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTAT 20043299 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 | || ||||| || |||| || ||||||| | | ||| || || || | | Sbjct 20043300 ATCCTCCCCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAAT 20043359 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | | || | ||||| ||||| |||||||| | |||||||| Sbjct 20043360 TTTTCCGTTTCTCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTA 20043413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397525942275200