Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_033703.1 Length=9314 Score E Sequences producing significant alignments: (Bits) Value seq7137 84.2 1e-12 >seq7137 Length=338409 Score = 84.2 bits (92), Expect = 1e-12 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 4540 AGTTATGGGGAAATTCTTGGGGC-TCCCAAATATCATCTCAAGAACTCATGAGTTCTTCG 4598 ||| ||||| ||||| |||| |||||| | | || | ||||||||||||||||| | Sbjct 155897 AGTCATGGGTCAATTCCTGGGTTATCCCAACT-TGATTTTGAGAACTCATGAGTTCTTTG 155839 Query 4599 AGAGGAGCTGGATTTACTACAATGACAGATCGGATTTGATGGAACTAGTTGAAGGTGAAA 4658 ||| ||| ||||| | ||||| ||| | |||||||||| | ||| ||| | Sbjct 155838 AGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGG 155779 Query 4659 TCCGCAACCGAACCACCCAAAGAGTTTGCTGGAATGGGCAACTGGGGGGACTTGAAGGGC 4718 | ||| || |||| ||||| || | || || ||| |||||||| ||||| Sbjct 155778 TTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGTT 155719 Query 4719 TAAGACAAAAAGGATGGAGT 4738 || | ||||| ||||||||| Sbjct 155718 TACGCCAAAAGGGATGGAGT 155699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29686700810560