Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_033703.1
Length=9314
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 84.2 1e-12
>seq7137
Length=338409
Score = 84.2 bits (92), Expect = 1e-12
Identities = 140/200 (70%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 4540 AGTTATGGGGAAATTCTTGGGGC-TCCCAAATATCATCTCAAGAACTCATGAGTTCTTCG 4598
||| ||||| ||||| |||| |||||| | | || | ||||||||||||||||| |
Sbjct 155897 AGTCATGGGTCAATTCCTGGGTTATCCCAACT-TGATTTTGAGAACTCATGAGTTCTTTG 155839
Query 4599 AGAGGAGCTGGATTTACTACAATGACAGATCGGATTTGATGGAACTAGTTGAAGGTGAAA 4658
||| ||| ||||| | ||||| ||| | |||||||||| | ||| ||| |
Sbjct 155838 AGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGG 155779
Query 4659 TCCGCAACCGAACCACCCAAAGAGTTTGCTGGAATGGGCAACTGGGGGGACTTGAAGGGC 4718
| ||| || |||| ||||| || | || || ||| |||||||| |||||
Sbjct 155778 TTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGTT 155719
Query 4719 TAAGACAAAAAGGATGGAGT 4738
|| | ||||| |||||||||
Sbjct 155718 TACGCCAAAAGGGATGGAGT 155699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 29686700810560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |