Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq7137 84.2 2e-12 >seq7137 Length=338409 Score = 84.2 bits (92), Expect = 2e-12 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 6756 TGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATGA 6815 ||| |||||||| ||||||||||| |||| | ||||| | || | || |||||||| Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 6816 ATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATG 6864 ||||||||| | || | || |||| |||||| ||| |||| |||||| Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATG 155798 Score = 78.8 bits (86), Expect = 7e-11 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 6737 GAGGAAAAGCAAATAATCCTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATC 6796 |||| | || ||| |||||| |||||||| ||||||||||| |||| | ||||| Sbjct 154246 GAGGTCAGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACT 154187 Query 6797 TCTTTGTAAGGACTCATGAATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGA 6852 | || | || |||||||| ||||||||| | || | || |||| |||||| ||| Sbjct 154186 TGATTTTGAGAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGA 154131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37420345546400