Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1413 206 5e-51 >seq1413 Length=14959 Score = 206 bits (228), Expect = 5e-51 Identities = 248/331 (75%), Gaps = 7/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||||| |||| ||| |||||||||| ||||||||| Sbjct 6240 CCCGACGAGGGGAGTGAAATAGACC-TGAAACCGAATGCCTACAAGCAGTCGGAGCCTCT 6182 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 6181 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 6124 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || |||||| ||||||| Sbjct 6123 CTTAAGCCGAT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGTCGAGTTG 6068 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| | Sbjct 6067 CTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACAC 6008 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| ||||||| |||||||| | |||||| | || ||||||| Sbjct 6007 GCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGGT 5948 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| |||||||||| || Sbjct 5947 GAAAGGCCAATCAAACTCGGAAATAGCTGGT 5917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972744229376