Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq993 150 3e-34 seq4538 80.6 4e-13 >seq993 Length=1104 Score = 150 bits (166), Expect = 3e-34 Identities = 178/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 1001 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 944 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 943 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 887 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 886 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 830 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || | |||| |||||||||||||||||||||||||||||| ||||| || Sbjct 829 GCAGTCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 782 >seq4538 Length=1087 Score = 80.6 bits (88), Expect = 4e-13 Identities = 52/56 (93%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||| |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 412 CGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751958235095