Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1049 127 4e-27 seq993 127 4e-27 seq1108 120 6e-25 seq3374 118 2e-24 >seq1049 Length=1331 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 1022 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 1081 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 1082 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 1140 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 1141 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 1200 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 1201 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 1259 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 1260 AAAGTTAGAGG 1270 >seq993 Length=1104 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 3 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 62 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 63 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 121 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 122 ATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACC 181 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| |||||||| || |||| ||||||||||||||||| ||||| Sbjct 182 GTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACG 240 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 241 AAAGTTAGAGG 251 >seq1108 Length=1017 Score = 120 bits (132), Expect = 6e-25 Identities = 184/253 (73%), Gaps = 11/253 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 292 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 351 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 || ||||| |||| ||| | | ||||| ||| ||||||| || | | |||||| Sbjct 352 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATG 410 Query 189 ATTAATAGGGATAGTCGGGGG--TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||||||| ||| |||| | | |||||| | |||||||||||||||||| Sbjct 411 ATTAATAGAAGCAGTTTGGGGGCTATTAGTATTACGACGCGAGAGGTGAAATTCTTGGAC 470 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC-ATTAATCAGTGAA 305 |||||||||| |||||||| || |||| ||||||||| |||||||| ||| Sbjct 471 CGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCTATTAATCA-AGAA 529 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 530 CGAAAGTTAGAGG 542 >seq3374 Length=1117 Score = 118 bits (130), Expect = 2e-24 Identities = 183/252 (73%), Gaps = 11/252 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT---TTGCTCGAATA-CATTAGCAT 130 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | |||| Sbjct 298 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCAT 357 Query 131 GGAATAATAGAATAGGACGTGCGGTTCT--ATTTTGTTGGTTTCTAGGAC-CGCCGTAAT 187 || ||||| |||| ||| | | ||||| || | ||||||| || | | ||||| Sbjct 358 GGGATAATGAAATAAGACCT-CTGTTCTGCTTTCTATTGGTTTTCAGATCAAGAGGTAAT 416 Query 188 GATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||||| || | ||||| | |||||| | |||||||||||||||||| Sbjct 417 GATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGAC 476 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||||| ||| |||||||| || |||| ||||||||||||||||| |||| Sbjct 477 CGTCGTAAGACT-ACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAAC 534 Query 307 GAAAGTTAGGGG 318 ||||||||| || Sbjct 535 GAAAGTTAGAGG 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915147531584