Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1413 334 2e-89 >seq1413 Length=14959 Score = 334 bits (370), Expect = 2e-89 Identities = 325/420 (77%), Gaps = 25/420 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||||||| | |||||||||| | || ||||||||| ||||| | | |||||||||| Sbjct 4805 CGCGGATACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGC 4864 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4865 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 4924 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || || ||| Sbjct 4925 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGTGCT-------- 4976 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || || || | |||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 4977 -CTCACACCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 5035 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||| || |||||| ||||||||||| ||||||||||| | |||||| | | | ||| Sbjct 5036 TCGACTTCGCAGAGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACC 5095 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCAC-CTTCTCCCGAAGTTAC 359 || ||| | || || || ||| | | ||| |||||||||||| Sbjct 5096 CGC--------------CAA-TGGTTGCCCACCAACGGGTCTCGCTTATCCCGAAGTTAC 5140 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 5141 ACGAGTAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATTCTCTACC 5200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260727718336