Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1413 367 3e-99 >seq1413 Length=14959 Score = 367 bits (406), Expect = 3e-99 Identities = 339/416 (81%), Gaps = 19/416 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | || ||||||| |||||||| || ||| Sbjct 5956 CCACAGCTCATCCCCG--ACTTTTTCAACAGGCGTGGGTTCGGCCCTCCAGTGCGT-GTT 6012 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| || |||| |||| || |||||| | |||||| ||||||| | | ||||| Sbjct 6013 ACCGCACCTT-CAGCCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCT-TCTGCCAGC 6068 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| ||||||||| | ||||||||||| |||||||||| | ||||| | ||||||| Sbjct 6069 AACTCGACGCCCTATTCAGACTCGCTTT-CGCTACGCCTACACCTATCGGCTTAAGCT-- 6125 Query 188 GCCACTGAAAATA---AGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 | ||| ||| | | |||||||||||||||||||||||||||| ||||||| | || Sbjct 6126 --CGCTGCAAACAGAAACTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCATAAG 6183 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 |||||| |||||||||| |||| |||||||||| ||||||||||||||||| |||| Sbjct 6184 A--GGCTCCGACTGCTTGTAGGCATTCGGTTTCAGG-TCTATTTCACTCCCCTCGTCGGG 6240 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct 6241 GTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCACCAGGGAGTATTTAGG 6300 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| |||||||||||| |||||||| ||||| ||||| ||| |||||||| Sbjct 6301 CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTCG 6356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241528819072