Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1413 300 2e-79 >seq1413 Length=14959 Score = 300 bits (332), Expect = 2e-79 Identities = 231/274 (84%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||| |||| |||||||| ||| | Sbjct 4079 GAGGTGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCACACTTAGCTACCCGG 4138 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 4139 CGGTGCCGCTGGCGCGACAACCGGTGCACCAGAGGTGTGTTCATCCCGGTCCTCTCGTAC 4198 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || ||||| ||||||||| | ||| || ||||| | |||||||||||||||||||| | Sbjct 4199 TAGGGACAAATCCTCTCAAGTCTCCAACATCCACGGCAGATAGGGACCGAACTGTCTCAC 4258 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||| Sbjct 4259 GACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 4318 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 4319 TGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 4352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780756635588