Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1413 358 2e-96 >seq1413 Length=14959 Score = 358 bits (396), Expect = 2e-96 Identities = 370/478 (77%), Gaps = 6/478 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | ||| ||||| | |||||||||||| ||||||||| |||| Sbjct 6092 CGAGTCTGAATAGGGCGTCGAGTTGCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCAT 6033 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 6032 GGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAG 5973 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||| Sbjct 5972 TCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCTC 5913 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTA-TCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| ||||| |||||| | ||| ||| | ||| ||||||||||||||| | Sbjct 5912 CGCGAAATCTATTGAGGTAGACCGTCAGGTATTTACCCCGGGGGGTAGAGCACTGGATGG 5853 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| | | ||||||||||| |||||||||||| | | || | || Sbjct 5852 GCTAGGGGGGCCCAAAGCCTTACCAAACCTAACCAAACTCCGAATACCCGGAAG-TATAG 5794 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 | || || || ||||||||||||||| | ||||||| || | || ||| | Sbjct 5793 CCTGGCAGACAGACAGTGGGTGCTAAGGTCCATTGTCGAGAGGGAAACAGCCCAGACCAC 5734 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||||||| |||| ||||||| | || || || | | | || ||| | Sbjct 5733 CAGCTAAGGCCCCCAAATCGTGGCTAAGTGGGA--AAGGATGTGGGGATTCCAAAACAAC 5676 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||| |||||||| |||||||||| || |||||||| |||||| |||||||| ||| Sbjct 5675 CAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 5619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689503135232