Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1413 181 2e-43 >seq1413 Length=14959 Score = 181 bits (200), Expect = 2e-43 Identities = 231/314 (74%), Gaps = 13/314 (4%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTAC----AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 |||||||||||||| ||| |||||||||||||||||| | ||||| ||||| Sbjct 6684 GGTGGATGCCTTGG----TACCAGGAGGCGATGAAGGACGTAGCACGCTGCGAAAAGCTA 6629 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 ||||||| || | || |||||||||| |||| ||||||||||| ||||| || Sbjct 6628 CGGGGAGCC-GCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGCAA 6570 Query 126 GGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTA 185 |||| || || ||||||||||||| || | |||||| ||| |||||||||||||| Sbjct 6569 GGGT-ATCACAGTCTGAATACATAGGGCTGTGAGGCGAACCCGGGGAACTGAAACATCTC 6511 Query 186 AGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGAT 245 |||| ||| ||||||||| ||||| ||||||| |||||||||||||||| ||| Sbjct 6510 AGTACCTGGAGGAAAAGACATCAATTGAGATTCTGCTAGTAGTGGCGAGCGAACGCGGAA 6451 Query 246 GAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGG 305 || | | || ||||| || ||| |||||||| ||||||| || Sbjct 6450 CAGGC---CAGTCATTTTTGAAGAAGAAGCAGAAGGATCTGGAAAGGTCCGCCATAGTGG 6394 Query 306 GTGATAGCCCCGTA 319 |||||||||||||| Sbjct 6393 GTGATAGCCCCGTA 6380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918347348128