Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1413 352 1e-94 >seq1413 Length=14959 Score = 352 bits (390), Expect = 1e-94 Identities = 417/565 (74%), Gaps = 21/565 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | ||||||||||| || ||| ||| || |||||| || | | || || Sbjct 4487 TCGAGCTGTCACTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGGTTTCC 4546 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | ||||| ||| | | |||||||||||||| ||||||||| | |||||||||| Sbjct 4547 GACCGGCCTGAGCCCACCATCGCGCGCCTCCGTTACACTTTGGGAGG-CGACCGCCCCAG 4605 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| ||||||| || ||||| | | | | | | || ||||||| ||| Sbjct 4606 TCAAACTGCCCACCATACAGGGTCCCGGATCAGGCTAACTGACCGCGGTTAGACATCAGA 4665 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | |||| |||||||||||| | | |||||| ||| ||| |||| ||| || Sbjct 4666 AAAATTCAGGGTGGTATTTCAAGGATGGCTCCACGGGAACTGGCGCCCCCGCTTCAAAGC 4725 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | |||||| | ||||| ||| ||||| | Sbjct 4726 CTCCCACCTATCCTACACAGAATGTCTCTGATGCCACTGTAAAGCTGCAGTAAAGGTTCA 4785 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| |||| ||||| | | ||||||| || | | | ||||||| | | Sbjct 4786 TAGGGTCTTTCCGTCTGACCGCGGATACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 4845 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||| || | |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 4846 AGCCGATGCTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 4905 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 4906 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTC 4965 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| ||| ||| ||||| ||||||||||||||| |||||| Sbjct 4966 AAT--------TCA-----------GTGCTCTCACACCTCCTCTTAACCTTCCGGCACCG 5006 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 5007 GGCAGGCGTCAGGCCCTATACGTCG 5031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702302401408