Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3371 167 4e-39 seq3091 167 4e-39 seq2806 163 5e-38 seq3020 134 2e-29 seq10171 129 9e-28 seq3032 87.8 3e-15 seq10896 84.2 3e-14 seq11795 73.4 6e-11 >seq3371 Length=1135500 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 156889 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 156830 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 156829 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 156790 Score = 147 bits (162), Expect = 3e-33 Identities = 86/89 (97%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 28812 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 28871 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||||||||||||| || |||||||||| Sbjct 28872 ACCACCACCCATAGATTCGAGAAAGAGCT 28900 Score = 89.7 bits (98), Expect = 8e-16 Identities = 85/105 (81%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 157137 TCATTGTAGTGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 157079 Query 76 AAACT-TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || | | | ||| || || | | |||| | ||||||| || Sbjct 157078 AATCTCTTTAAT-GCTAGACGCAATTTGTCCATTAAAGAAGCTAG 157035 Score = 82.4 bits (90), Expect = 1e-13 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| || ||| |||||||||| ||||||||||||||||||| ||| Sbjct 94137 TCATTGTAGCGCGCGTGCAGCTCAGGACATCTAAGGACATCACAGACCTGTTATTG-CTC 94195 Query 76 AAACT 80 || || Sbjct 94196 AATCT 94200 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| || ||| |||||||||| ||||||||||| ||||||| ||| Sbjct 28566 TCATTGTAGCGCGCGTGCAGCTCAGGACATCTAAGGACATCACAGACCCGTTATTG-CTC 28624 Query 76 AAACT 80 || || Sbjct 28625 AATCT 28629 >seq3091 Length=48052 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3801 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 3860 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 3861 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 3900 Score = 93.3 bits (102), Expect = 7e-17 Identities = 87/106 (82%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||| Sbjct 3554 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA-CTGTTATTG-CTC 3611 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 3612 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 3655 >seq2806 Length=271964 Score = 163 bits (180), Expect = 5e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 224434 GTCTCGTTCGTTATCGGAATTAACCAGACAAAGCACTCCACGAACTAAGAACGGCCATGC 224493 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 224494 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 224533 Score = 93.3 bits (102), Expect = 7e-17 Identities = 86/106 (81%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| Sbjct 224186 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTGAGGGCATCACAGACCTGTTATTG-CTC 224244 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | ||| | |||||||| || Sbjct 224245 AATCT--CATTATTGCTAGATGCAATTTTTCCATTTAAGAAGCTAG 224288 >seq3020 Length=42005 Score = 134 bits (148), Expect = 2e-29 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| ||| Sbjct 39023 GTCTCGTTCGTTATCGGAATTAACAAGACAAATCACTTCACGAACTAAGAACGGCCCTGC 39082 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCT 260 |||||||||| || | || ||||| |||||||| ||||||| Sbjct 39083 ACCACCACCCTTAAATTCGAGAAAAAGCTATCATCCTGTCCT 39124 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||| Sbjct 38775 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACACACCTGTTATTG-CTC 38833 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 38834 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 38877 >seq10171 Length=1662 Score = 129 bits (142), Expect = 9e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| | ||| |||||||||||||||||||||| |||||||||||||||||| | Sbjct 136 CTATTTAATATATTAGAGTCTCGTTCGTTATCGGAATTAGCCAGACAAATCACTCCACGA 77 Query 202 ACTAAGAACGG-CCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | || |||||| ||||||||||||||||||||| || || |||||||| ||||||| Sbjct 76 ATTAGGAACGGCCCATGCACCACCACCCATAGATTCTAG-TAGAGCTATTCATCTGTC 20 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||| Sbjct 367 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCACCACAGACCTGTTATTG-CTC 309 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 308 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 265 >seq3032 Length=44882 Score = 87.8 bits (96), Expect = 3e-15 Identities = 85/106 (80%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| Sbjct 44633 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGACATCACAGACCTGTTATTG-CTC 44691 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | |||| | | |||||| || Sbjct 44692 AATCT--CATTATTGCTAGACGCAGTTTGTCCATTTCAGAAGCTAG 44735 >seq10896 Length=1288 Score = 84.2 bits (92), Expect = 3e-14 Identities = 84/106 (79%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||| ||| |||||| |||||||||| ||||||||||||||||||| ||| Sbjct 245 TCATTGTAGCGCGCATGCAGCCCAGGACATCTAAGGACATCACAGACCTGTTATTG-CTC 187 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | |||| | | |||||| || Sbjct 186 AATCT--CATTATTGCTAGACGCAGTTTGTCCATTTCAGAAGCTAG 143 >seq11795 Length=1990 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 ||| |||| ||||||||| ||| || |||||||||||||||||||| |||||||||| Sbjct 1144 TCAATGTAACGCGCGTGCAGCC-AGGACATCTAAGGGCATCACAGATCTGTTATTGC 1199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796695561930